Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.89■□□□□ 0.29
UPK1BO75841 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UPK1BO75841 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK1BO75841 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
UPK1BO75841 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UPK1BO75841 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK1BO75841 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
UPK1BO75841 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK1BO75841 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.88■□□□□ 0.29
UPK1BO75841 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK1BO75841 AL162741.1-201ENST00000565563 1558 ntBASIC16.88■□□□□ 0.29
UPK1BO75841 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK1BO75841 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
UPK1BO75841 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
UPK1BO75841 AC005224.4-201ENST00000583262 1652 ntBASIC16.88■□□□□ 0.29
UPK1BO75841 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK1BO75841 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 AC080080.1-201ENST00000625121 2420 ntBASIC16.87■□□□□ 0.29
UPK1BO75841 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
UPK1BO75841 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.87■□□□□ 0.29
UPK1BO75841 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
UPK1BO75841 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.87■□□□□ 0.29
UPK1BO75841 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
UPK1BO75841 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.87■□□□□ 0.29
UPK1BO75841 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK1BO75841 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK1BO75841 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
UPK1BO75841 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UPK1BO75841 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1BO75841 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.86■□□□□ 0.29
UPK1BO75841 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.86■□□□□ 0.29
UPK1BO75841 AC010997.5-201ENST00000609182 354 ntBASIC16.86■□□□□ 0.29
UPK1BO75841 AC011270.2-201ENST00000624293 2550 ntBASIC16.86■□□□□ 0.29
UPK1BO75841 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
UPK1BO75841 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK1BO75841 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.86■□□□□ 0.29
UPK1BO75841 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UPK1BO75841 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
UPK1BO75841 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms