Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.44■■□□□ 1.5
CACNA1FO60840 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CACNA1FO60840 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNA1FO60840 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNA1FO60840 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.43■■□□□ 1.5
CACNA1FO60840 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
CACNA1FO60840 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNA1FO60840 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 AC097493.4-201ENST00000641197 219 ntBASIC24.43■■□□□ 1.5
CACNA1FO60840 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNA1FO60840 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.43■■□□□ 1.5
CACNA1FO60840 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CACNA1FO60840 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CACNA1FO60840 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.42■■□□□ 1.5
CACNA1FO60840 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.42■■□□□ 1.5
CACNA1FO60840 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.42■■□□□ 1.5
CACNA1FO60840 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
CACNA1FO60840 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.42■■□□□ 1.5
CACNA1FO60840 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.42■■□□□ 1.5
CACNA1FO60840 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CACNA1FO60840 AC007663.1-201ENST00000438948 1240 ntBASIC24.42■■□□□ 1.5
CACNA1FO60840 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CACNA1FO60840 CKBP1-201ENST00000565489 1086 ntBASIC24.42■■□□□ 1.5
CACNA1FO60840 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CACNA1FO60840 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.41■■□□□ 1.5
CACNA1FO60840 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CACNA1FO60840 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 MIR1238-201ENST00000408483 83 ntBASIC24.41■■□□□ 1.5
CACNA1FO60840 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CACNA1FO60840 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.41■■□□□ 1.5
CACNA1FO60840 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.41■■□□□ 1.5
CACNA1FO60840 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CACNA1FO60840 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.4■■□□□ 1.5
CACNA1FO60840 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.4■■□□□ 1.5
CACNA1FO60840 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.4■■□□□ 1.5
CACNA1FO60840 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.4■■□□□ 1.5
CACNA1FO60840 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.4■■□□□ 1.5
CACNA1FO60840 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.4■■□□□ 1.5
CACNA1FO60840 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 MMP23A-201ENST00000234610 1017 ntBASIC24.4■■□□□ 1.5
CACNA1FO60840 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.4■■□□□ 1.5
CACNA1FO60840 SLC25A1P4-201ENST00000567977 778 ntBASIC24.4■■□□□ 1.5
CACNA1FO60840 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
CACNA1FO60840 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
CACNA1FO60840 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CACNA1FO60840 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.39■■□□□ 1.5
CACNA1FO60840 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CACNA1FO60840 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CACNA1FO60840 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 AC113347.1-201ENST00000413321 391 ntBASIC24.39■■□□□ 1.49
CACNA1FO60840 AC145285.6-201ENST00000604632 637 ntBASIC24.39■■□□□ 1.49
CACNA1FO60840 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.39■■□□□ 1.49
CACNA1FO60840 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.39■■□□□ 1.49
CACNA1FO60840 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.39■■□□□ 1.49
CACNA1FO60840 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CACNA1FO60840 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CACNA1FO60840 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.38■■□□□ 1.49
CACNA1FO60840 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.38■■□□□ 1.49
CACNA1FO60840 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms