Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.22■□□□□ 0.51
PLOD3O60568 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PLOD3O60568 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PLOD3O60568 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PLOD3O60568 KRT8P8-201ENST00000434750 1448 ntBASIC18.22■□□□□ 0.51
PLOD3O60568 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PLOD3O60568 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.21■□□□□ 0.51
PLOD3O60568 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.21■□□□□ 0.51
PLOD3O60568 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PLOD3O60568 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PLOD3O60568 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.21■□□□□ 0.51
PLOD3O60568 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 POU5F1P3-201ENST00000428824 1078 ntBASIC18.21■□□□□ 0.51
PLOD3O60568 TUBB8P6-201ENST00000436895 1288 ntBASIC18.21■□□□□ 0.51
PLOD3O60568 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.21■□□□□ 0.51
PLOD3O60568 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.21■□□□□ 0.51
PLOD3O60568 MIR4651-201ENST00000582622 73 ntBASIC18.21■□□□□ 0.51
PLOD3O60568 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PLOD3O60568 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PLOD3O60568 HCG11-201ENST00000411553 5696 ntBASIC18.21■□□□□ 0.51
PLOD3O60568 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.21■□□□□ 0.51
PLOD3O60568 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
PLOD3O60568 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PLOD3O60568 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PLOD3O60568 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.2■□□□□ 0.5
PLOD3O60568 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PLOD3O60568 AC006058.3-201ENST00000606217 1069 ntBASIC18.2■□□□□ 0.5
PLOD3O60568 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.2■□□□□ 0.5
PLOD3O60568 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.2■□□□□ 0.5
PLOD3O60568 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.2■□□□□ 0.5
PLOD3O60568 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.2■□□□□ 0.5
PLOD3O60568 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PLOD3O60568 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 AC093484.2-201ENST00000580996 2166 ntBASIC18.2■□□□□ 0.5
PLOD3O60568 NBPF21P-201ENST00000425093 1451 ntBASIC18.2■□□□□ 0.5
PLOD3O60568 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PLOD3O60568 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.19■□□□□ 0.5
PLOD3O60568 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PLOD3O60568 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PLOD3O60568 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.19■□□□□ 0.5
PLOD3O60568 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.19■□□□□ 0.5
PLOD3O60568 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.19■□□□□ 0.5
PLOD3O60568 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.19■□□□□ 0.5
PLOD3O60568 AC073648.6-201ENST00000641589 218 ntBASIC18.19■□□□□ 0.5
PLOD3O60568 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PLOD3O60568 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.19■□□□□ 0.5
PLOD3O60568 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PLOD3O60568 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PLOD3O60568 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PLOD3O60568 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PLOD3O60568 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PLOD3O60568 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PLOD3O60568 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PLOD3O60568 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms