Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.45■□□□□ 0.38
ZIC3O60481 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.45■□□□□ 0.38
ZIC3O60481 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.44■□□□□ 0.38
ZIC3O60481 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
ZIC3O60481 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.44■□□□□ 0.38
ZIC3O60481 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
ZIC3O60481 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.44■□□□□ 0.38
ZIC3O60481 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.44■□□□□ 0.38
ZIC3O60481 AP000692.2-201ENST00000608391 879 ntBASIC17.44■□□□□ 0.38
ZIC3O60481 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
ZIC3O60481 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZIC3O60481 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZIC3O60481 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.43■□□□□ 0.38
ZIC3O60481 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
ZIC3O60481 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.43■□□□□ 0.38
ZIC3O60481 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.43■□□□□ 0.38
ZIC3O60481 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.43■□□□□ 0.38
ZIC3O60481 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZIC3O60481 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ZIC3O60481 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.43■□□□□ 0.38
ZIC3O60481 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.43■□□□□ 0.38
ZIC3O60481 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.43■□□□□ 0.38
ZIC3O60481 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.43■□□□□ 0.38
ZIC3O60481 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 AP000525.1-201ENST00000608286 694 ntBASIC17.43■□□□□ 0.38
ZIC3O60481 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.43■□□□□ 0.38
ZIC3O60481 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.43■□□□□ 0.38
ZIC3O60481 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 SDHAP1-207ENST00000440850 2000 ntBASIC17.43■□□□□ 0.38
ZIC3O60481 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZIC3O60481 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZIC3O60481 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
ZIC3O60481 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZIC3O60481 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.42■□□□□ 0.38
ZIC3O60481 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.42■□□□□ 0.38
ZIC3O60481 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.42■□□□□ 0.38
ZIC3O60481 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.42■□□□□ 0.38
ZIC3O60481 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.42■□□□□ 0.38
ZIC3O60481 DGCR10-201ENST00000609839 495 ntBASIC17.42■□□□□ 0.38
ZIC3O60481 AC073912.3-201ENST00000624414 853 ntBASIC17.42■□□□□ 0.38
ZIC3O60481 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.42■□□□□ 0.38
ZIC3O60481 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZIC3O60481 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.42■□□□□ 0.38
ZIC3O60481 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.42■□□□□ 0.38
ZIC3O60481 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.41■□□□□ 0.38
ZIC3O60481 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.41■□□□□ 0.38
ZIC3O60481 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZIC3O60481 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 FITM1-202ENST00000559294 800 ntBASIC17.41■□□□□ 0.38
ZIC3O60481 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.41■□□□□ 0.38
ZIC3O60481 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 Z82202.1-201ENST00000623446 1880 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms