Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SDHAP1-207ENST00000440850 2000 ntBASIC18.52■□□□□ 0.56
LCMT2O60294 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LCMT2O60294 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.52■□□□□ 0.56
LCMT2O60294 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LCMT2O60294 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LCMT2O60294 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.52■□□□□ 0.56
LCMT2O60294 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.52■□□□□ 0.56
LCMT2O60294 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LCMT2O60294 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.52■□□□□ 0.56
LCMT2O60294 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.52■□□□□ 0.56
LCMT2O60294 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.52■□□□□ 0.56
LCMT2O60294 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LCMT2O60294 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.52■□□□□ 0.56
LCMT2O60294 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.52■□□□□ 0.56
LCMT2O60294 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LCMT2O60294 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.52■□□□□ 0.56
LCMT2O60294 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LCMT2O60294 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LCMT2O60294 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.51■□□□□ 0.55
LCMT2O60294 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LCMT2O60294 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.51■□□□□ 0.55
LCMT2O60294 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LCMT2O60294 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 AL353807.1-201ENST00000427475 662 ntBASIC18.51■□□□□ 0.55
LCMT2O60294 KSR1P1-201ENST00000446298 240 ntBASIC18.51■□□□□ 0.55
LCMT2O60294 AC233702.5-201ENST00000584107 538 ntBASIC18.51■□□□□ 0.55
LCMT2O60294 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.51■□□□□ 0.55
LCMT2O60294 AC073195.1-201ENST00000607241 877 ntBASIC18.51■□□□□ 0.55
LCMT2O60294 AL445675.2-201ENST00000620291 557 ntBASIC18.51■□□□□ 0.55
LCMT2O60294 CR392000.1-201ENST00000624770 1228 ntBASIC18.51■□□□□ 0.55
LCMT2O60294 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.51■□□□□ 0.55
LCMT2O60294 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.51■□□□□ 0.55
LCMT2O60294 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.51■□□□□ 0.55
LCMT2O60294 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LCMT2O60294 AC005332.7-201ENST00000614046 2005 ntBASIC18.5■□□□□ 0.55
LCMT2O60294 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LCMT2O60294 AL135905.2-201ENST00000584934 1404 ntBASIC18.5■□□□□ 0.55
LCMT2O60294 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.5■□□□□ 0.55
LCMT2O60294 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.5■□□□□ 0.55
LCMT2O60294 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.5■□□□□ 0.55
LCMT2O60294 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 AL160286.2-201ENST00000567150 934 ntBASIC18.5■□□□□ 0.55
LCMT2O60294 AP006294.2-201ENST00000641667 209 ntBASIC18.5■□□□□ 0.55
LCMT2O60294 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.5■□□□□ 0.55
LCMT2O60294 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LCMT2O60294 AL032819.2-201ENST00000624543 2162 ntBASIC18.49■□□□□ 0.55
LCMT2O60294 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.49■□□□□ 0.55
LCMT2O60294 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LCMT2O60294 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.49■□□□□ 0.55
LCMT2O60294 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.49■□□□□ 0.55
LCMT2O60294 FAM197Y1-201ENST00000421178 764 ntBASIC18.49■□□□□ 0.55
LCMT2O60294 AC012618.2-201ENST00000428058 849 ntBASIC18.49■□□□□ 0.55
LCMT2O60294 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.49■□□□□ 0.55
LCMT2O60294 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.49■□□□□ 0.55
LCMT2O60294 AC113410.3-201ENST00000623366 203 ntBASIC18.49■□□□□ 0.55
LCMT2O60294 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms