Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.36■□□□□ 0.69
LDB2O43679 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LDB2O43679 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.36■□□□□ 0.69
LDB2O43679 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.36■□□□□ 0.69
LDB2O43679 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LDB2O43679 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
LDB2O43679 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LDB2O43679 AC141586.3-201ENST00000562166 1838 ntBASIC19.35■□□□□ 0.69
LDB2O43679 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 PRORSD1P-201ENST00000295112 541 ntBASIC19.35■□□□□ 0.69
LDB2O43679 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.35■□□□□ 0.69
LDB2O43679 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LDB2O43679 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.35■□□□□ 0.69
LDB2O43679 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LDB2O43679 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.35■□□□□ 0.69
LDB2O43679 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LDB2O43679 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LDB2O43679 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 AL359736.2-201ENST00000621992 437 ntBASIC19.34■□□□□ 0.69
LDB2O43679 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB2O43679 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LDB2O43679 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB2O43679 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LDB2O43679 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDB2O43679 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB2O43679 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
LDB2O43679 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.33■□□□□ 0.69
LDB2O43679 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDB2O43679 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB2O43679 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDB2O43679 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LDB2O43679 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LDB2O43679 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB2O43679 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB2O43679 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB2O43679 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LDB2O43679 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.33■□□□□ 0.68
LDB2O43679 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LDB2O43679 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.33■□□□□ 0.68
LDB2O43679 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.33■□□□□ 0.68
LDB2O43679 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB2O43679 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB2O43679 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB2O43679 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LDB2O43679 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LDB2O43679 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB2O43679 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB2O43679 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LDB2O43679 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB2O43679 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB2O43679 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB2O43679 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB2O43679 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.32■□□□□ 0.68
LDB2O43679 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB2O43679 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LDB2O43679 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB2O43679 AL160286.2-201ENST00000567150 934 ntBASIC19.32■□□□□ 0.68
LDB2O43679 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LDB2O43679 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.32■□□□□ 0.68
LDB2O43679 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB2O43679 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.32■□□□□ 0.68
LDB2O43679 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.32■□□□□ 0.68
LDB2O43679 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB2O43679 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LDB2O43679 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms