Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGCEO43556 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.08■□□□□ 0.32
SGCEO43556 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.08■□□□□ 0.32
SGCEO43556 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.08■□□□□ 0.32
SGCEO43556 KRT17P3-201ENST00000420566 1262 ntBASIC17.08■□□□□ 0.32
SGCEO43556 AC026366.1-201ENST00000488803 879 ntBASIC17.08■□□□□ 0.32
SGCEO43556 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.08■□□□□ 0.32
SGCEO43556 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.08■□□□□ 0.32
SGCEO43556 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.08■□□□□ 0.32
SGCEO43556 PRKY-204ENST00000533551 1019 ntBASIC17.08■□□□□ 0.32
SGCEO43556 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.08■□□□□ 0.32
SGCEO43556 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.08■□□□□ 0.32
SGCEO43556 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.08■□□□□ 0.32
SGCEO43556 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SGCEO43556 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGCEO43556 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SGCEO43556 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.07■□□□□ 0.32
SGCEO43556 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.07■□□□□ 0.32
SGCEO43556 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
SGCEO43556 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.07■□□□□ 0.32
SGCEO43556 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.07■□□□□ 0.32
SGCEO43556 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.07■□□□□ 0.32
SGCEO43556 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.07■□□□□ 0.32
SGCEO43556 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.07■□□□□ 0.32
SGCEO43556 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SGCEO43556 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.07■□□□□ 0.32
SGCEO43556 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGCEO43556 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SGCEO43556 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.06■□□□□ 0.32
SGCEO43556 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.06■□□□□ 0.32
SGCEO43556 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.06■□□□□ 0.32
SGCEO43556 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.06■□□□□ 0.32
SGCEO43556 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.06■□□□□ 0.32
SGCEO43556 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SGCEO43556 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.06■□□□□ 0.32
SGCEO43556 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SGCEO43556 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SGCEO43556 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.05■□□□□ 0.32
SGCEO43556 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGCEO43556 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SGCEO43556 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SGCEO43556 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SGCEO43556 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SGCEO43556 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms