Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CHD2O14647 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD2O14647 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC27.02■■□□□ 1.92
CHD2O14647 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC27.02■■□□□ 1.92
CHD2O14647 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC27.02■■□□□ 1.92
CHD2O14647 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.92
CHD2O14647 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 SMG8-203ENST00000578922 2178 ntBASIC27.01■■□□□ 1.91
CHD2O14647 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC27.01■■□□□ 1.91
CHD2O14647 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
CHD2O14647 HLA-F-220ENST00000434407 884 ntBASIC27.01■■□□□ 1.91
CHD2O14647 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD2O14647 AC106795.1-205ENST00000512851 1056 ntBASIC27.01■■□□□ 1.91
CHD2O14647 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD2O14647 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC27.01■■□□□ 1.91
CHD2O14647 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD2O14647 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
CHD2O14647 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD2O14647 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 AL160237.2-201ENST00000556165 472 ntBASIC27■■□□□ 1.91
CHD2O14647 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
CHD2O14647 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC27■■□□□ 1.91
CHD2O14647 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC27■■□□□ 1.91
CHD2O14647 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
CHD2O14647 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC27■■□□□ 1.91
CHD2O14647 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD2O14647 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CHD2O14647 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC27■■□□□ 1.91
CHD2O14647 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CHD2O14647 KRT8P26-201ENST00000534154 1276 ntBASIC27■■□□□ 1.91
CHD2O14647 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC27■■□□□ 1.91
CHD2O14647 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD2O14647 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.99■■□□□ 1.91
CHD2O14647 AF106564.1-201ENST00000607058 2553 ntBASIC26.99■■□□□ 1.91
CHD2O14647 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.99■■□□□ 1.91
CHD2O14647 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 BUB3-202ENST00000368859 667 ntTSL 3 BASIC26.99■■□□□ 1.91
CHD2O14647 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC26.99■■□□□ 1.91
CHD2O14647 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC26.99■■□□□ 1.91
CHD2O14647 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD2O14647 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD2O14647 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD2O14647 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD2O14647 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.98■■□□□ 1.91
CHD2O14647 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD2O14647 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC26.98■■□□□ 1.91
CHD2O14647 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.98■■□□□ 1.91
CHD2O14647 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD2O14647 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC26.98■■□□□ 1.91
CHD2O14647 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD2O14647 AL162741.1-201ENST00000565563 1558 ntBASIC26.98■■□□□ 1.91
CHD2O14647 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.98■■□□□ 1.91
CHD2O14647 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC26.97■■□□□ 1.91
CHD2O14647 DRAXINP1-201ENST00000437611 948 ntBASIC26.97■■□□□ 1.91
CHD2O14647 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
CHD2O14647 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC26.97■■□□□ 1.91
CHD2O14647 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC26.97■■□□□ 1.91
CHD2O14647 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
CHD2O14647 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD2O14647 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.97■■□□□ 1.91
CHD2O14647 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD2O14647 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD2O14647 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD2O14647 NUS1P1-201ENST00000446295 882 ntBASIC26.97■■□□□ 1.91
CHD2O14647 SEC1P-202ENST00000473944 940 ntBASIC26.97■■□□□ 1.91
CHD2O14647 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC26.97■■□□□ 1.91
CHD2O14647 CIB2-208ENST00000560618 804 ntTSL 2 BASIC26.97■■□□□ 1.91
CHD2O14647 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CHD2O14647 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD2O14647 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CHD2O14647 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC26.96■■□□□ 1.91
CHD2O14647 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD2O14647 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.96■■□□□ 1.91
CHD2O14647 AL117328.2-201ENST00000624617 1940 ntBASIC26.96■■□□□ 1.91
CHD2O14647 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD2O14647 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CHD2O14647 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC26.96■■□□□ 1.91
CHD2O14647 AP000593.1-201ENST00000393668 712 ntBASIC26.95■■□□□ 1.91
CHD2O14647 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC26.95■■□□□ 1.91
CHD2O14647 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CHD2O14647 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms