Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC022494.1-201ENST00000466044 728 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.3■□□□□ 0.52
CACNA1AO00555 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.3■□□□□ 0.52
CACNA1AO00555 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
CACNA1AO00555 Z69720.1-201ENST00000601483 472 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.3■□□□□ 0.52
CACNA1AO00555 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 AL117328.2-201ENST00000624617 1940 ntBASIC18.3■□□□□ 0.52
CACNA1AO00555 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CACNA1AO00555 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1AO00555 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 DUX4L17-201ENST00000557360 1267 ntBASIC18.29■□□□□ 0.52
CACNA1AO00555 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.29■□□□□ 0.52
CACNA1AO00555 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1AO00555 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.29■□□□□ 0.52
CACNA1AO00555 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.29■□□□□ 0.52
CACNA1AO00555 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.29■□□□□ 0.52
CACNA1AO00555 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.29■□□□□ 0.52
CACNA1AO00555 MIR4674-201ENST00000582457 87 ntBASIC18.29■□□□□ 0.52
CACNA1AO00555 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 AC099336.1-202ENST00000602961 463 ntBASIC18.29■□□□□ 0.52
CACNA1AO00555 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CACNA1AO00555 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CACNA1AO00555 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1AO00555 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.29■□□□□ 0.52
CACNA1AO00555 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CACNA1AO00555 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.28■□□□□ 0.52
CACNA1AO00555 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1AO00555 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.28■□□□□ 0.52
CACNA1AO00555 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1AO00555 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CACNA1AO00555 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1AO00555 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CACNA1AO00555 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.28■□□□□ 0.52
CACNA1AO00555 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.27■□□□□ 0.52
CACNA1AO00555 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.27■□□□□ 0.52
CACNA1AO00555 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.27■□□□□ 0.52
CACNA1AO00555 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 AC084346.2-201ENST00000607097 949 ntBASIC18.27■□□□□ 0.52
CACNA1AO00555 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
CACNA1AO00555 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CACNA1AO00555 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.27■□□□□ 0.52
CACNA1AO00555 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CACNA1AO00555 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CACNA1AO00555 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.27■□□□□ 0.52
CACNA1AO00555 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1AO00555 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.27■□□□□ 0.51
CACNA1AO00555 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CACNA1AO00555 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CACNA1AO00555 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.27■□□□□ 0.51
CACNA1AO00555 AC005034.1-201ENST00000426657 489 ntBASIC18.26■□□□□ 0.51
CACNA1AO00555 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.26■□□□□ 0.51
CACNA1AO00555 SEC1P-202ENST00000473944 940 ntBASIC18.26■□□□□ 0.51
CACNA1AO00555 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1AO00555 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1AO00555 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CACNA1AO00555 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.26■□□□□ 0.51
CACNA1AO00555 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.26■□□□□ 0.51
CACNA1AO00555 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms