Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.36■□□□□ 0.53
UPK1AO00322 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.35■□□□□ 0.53
UPK1AO00322 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPK1AO00322 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UPK1AO00322 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UPK1AO00322 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1AO00322 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.34■□□□□ 0.53
UPK1AO00322 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
UPK1AO00322 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UPK1AO00322 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.34■□□□□ 0.53
UPK1AO00322 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.34■□□□□ 0.53
UPK1AO00322 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.34■□□□□ 0.53
UPK1AO00322 RNA5SP413-201ENST00000516373 109 ntBASIC18.34■□□□□ 0.53
UPK1AO00322 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.34■□□□□ 0.53
UPK1AO00322 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.34■□□□□ 0.53
UPK1AO00322 AL121906.2-201ENST00000621597 723 ntBASIC18.34■□□□□ 0.53
UPK1AO00322 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.34■□□□□ 0.53
UPK1AO00322 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.34■□□□□ 0.53
UPK1AO00322 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1AO00322 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1AO00322 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1AO00322 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1AO00322 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1AO00322 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.33■□□□□ 0.52
UPK1AO00322 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1AO00322 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.33■□□□□ 0.52
UPK1AO00322 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.33■□□□□ 0.52
UPK1AO00322 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
UPK1AO00322 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.33■□□□□ 0.52
UPK1AO00322 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1AO00322 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.33■□□□□ 0.52
UPK1AO00322 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1AO00322 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
UPK1AO00322 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.33■□□□□ 0.52
UPK1AO00322 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
UPK1AO00322 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
UPK1AO00322 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
UPK1AO00322 KRT18P6-201ENST00000555540 1265 ntBASIC18.32■□□□□ 0.52
UPK1AO00322 AC008403.3-201ENST00000598924 454 ntBASIC18.32■□□□□ 0.52
UPK1AO00322 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.32■□□□□ 0.52
UPK1AO00322 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 AC009113.1-201ENST00000570267 2443 ntBASIC18.32■□□□□ 0.52
UPK1AO00322 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 AC104581.1-202ENST00000635932 2618 ntBASIC18.32■□□□□ 0.52
UPK1AO00322 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UPK1AO00322 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1AO00322 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1AO00322 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPK1AO00322 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms