Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01548A6NM66 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC01548A6NM66 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 AC011506.1-201ENST00000474329 610 ntBASIC15.28■□□□□ 0.04
LINC01548A6NM66 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LINC01548A6NM66 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01548A6NM66 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 AC007952.6-201ENST00000573168 2673 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 AC003957.1-201ENST00000625108 2673 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 AC104417.2-201ENST00000562989 1793 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 NUDT16P1-203ENST00000513809 620 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01548A6NM66 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 AL355075.4-201ENST00000554988 638 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 AL160286.2-201ENST00000567150 934 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.27■□□□□ 0.04
LINC01548A6NM66 REXO1L10P-201ENST00000615707 1290 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 REXO1L12P-201ENST00000622156 912 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 AC131212.4-201ENST00000623606 975 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 AL031985.4-201ENST00000642138 673 ntBASIC15.27■□□□□ 0.04
LINC01548A6NM66 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01548A6NM66 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01548A6NM66 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LINC01548A6NM66 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01548A6NM66 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01548A6NM66 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LINC01548A6NM66 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 ZNF815P-204ENST00000434898 1737 ntBASIC15.26■□□□□ 0.03
LINC01548A6NM66 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 KRT17P2-201ENST00000300992 1314 ntBASIC15.26■□□□□ 0.03
LINC01548A6NM66 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 AC008040.2-201ENST00000461049 708 ntBASIC15.26■□□□□ 0.03
LINC01548A6NM66 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 MIR4785-201ENST00000585005 73 ntBASIC15.26■□□□□ 0.03
LINC01548A6NM66 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 Z82202.1-201ENST00000623446 1880 ntBASIC15.26■□□□□ 0.03
LINC01548A6NM66 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01548A6NM66 SDHAP1-207ENST00000440850 2000 ntBASIC15.26■□□□□ 0.03
LINC01548A6NM66 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC01548A6NM66 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms