Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL160286.2-201ENST00000567150 934 ntBASIC18.41■□□□□ 0.54
LRIT2A6NDA9 AF186192.3-201ENST00000583427 947 ntBASIC18.41■□□□□ 0.54
LRIT2A6NDA9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 AL445675.2-201ENST00000620291 557 ntBASIC18.41■□□□□ 0.54
LRIT2A6NDA9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT2A6NDA9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 AL135905.2-201ENST00000584934 1404 ntBASIC18.4■□□□□ 0.54
LRIT2A6NDA9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.4■□□□□ 0.54
LRIT2A6NDA9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LRIT2A6NDA9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.39■□□□□ 0.54
LRIT2A6NDA9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRIT2A6NDA9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 KSR1P1-201ENST00000446298 240 ntBASIC18.39■□□□□ 0.53
LRIT2A6NDA9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT2A6NDA9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 RPS2P4-201ENST00000476944 856 ntBASIC18.38■□□□□ 0.53
LRIT2A6NDA9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT2A6NDA9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms