Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 TNXA-203ENST00000507684 2038 ntBASIC17.79■□□□□ 0.44
CDHR4A6H8M9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 RNA5SP413-201ENST00000516373 109 ntBASIC17.79■□□□□ 0.44
CDHR4A6H8M9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 AP003097.1-201ENST00000530657 1135 ntBASIC17.79■□□□□ 0.44
CDHR4A6H8M9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
CDHR4A6H8M9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 SDHAP1-207ENST00000440850 2000 ntBASIC17.78■□□□□ 0.44
CDHR4A6H8M9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDHR4A6H8M9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 PRKY-204ENST00000533551 1019 ntBASIC17.77■□□□□ 0.44
CDHR4A6H8M9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.77■□□□□ 0.44
CDHR4A6H8M9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CDHR4A6H8M9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.77■□□□□ 0.43
CDHR4A6H8M9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDHR4A6H8M9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms