Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
A0A1W2PRF3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
A0A1W2PRF3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.92■□□□□ 0.14
A0A1W2PRF3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
A0A1W2PRF3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.92■□□□□ 0.14
A0A1W2PRF3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
A0A1W2PRF3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 AL353807.1-201ENST00000427475 662 ntBASIC15.91■□□□□ 0.14
A0A1W2PRF3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 AL355355.2-201ENST00000442321 338 ntBASIC15.91■□□□□ 0.14
A0A1W2PRF3 TSPY15P-201ENST00000457163 923 ntBASIC15.91■□□□□ 0.14
A0A1W2PRF3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 KRT18P16-201ENST00000510337 1294 ntBASIC15.91■□□□□ 0.14
A0A1W2PRF3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 AC073195.1-201ENST00000607241 877 ntBASIC15.91■□□□□ 0.14
A0A1W2PRF3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.91■□□□□ 0.14
A0A1W2PRF3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
A0A1W2PRF3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 AC026471.5-201ENST00000615068 467 ntBASIC15.9■□□□□ 0.14
A0A1W2PRF3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.9■□□□□ 0.14
A0A1W2PRF3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
A0A1W2PRF3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
A0A1W2PRF3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
A0A1W2PRF3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
A0A1W2PRF3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
A0A1W2PRF3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
A0A1W2PRF3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
A0A1W2PRF3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
A0A1W2PRF3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms