Protein–RNA interactions for Protein: A0A0J9YWF9

TRBV2, T-cell receptor beta variable 2 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV2A0A0J9YWF9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 AC104581.1-202ENST00000635932 2618 ntBASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV2A0A0J9YWF9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 DUX4L16-201ENST00000555130 1264 ntBASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 AC116351.2-201ENST00000606540 1585 ntBASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
TRBV2A0A0J9YWF9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV2A0A0J9YWF9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms