Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC026271.3-201ENST00000571884 352 ntBASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC004980.1-204ENST00000429707 299 ntBASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IGHV4-28A0A0C4DH34 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 UNC93B2-201ENST00000285383 730 ntBASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 RBM17P1-201ENST00000453646 1190 ntBASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 MIR6786-201ENST00000616843 113 ntBASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IGHV4-28A0A0C4DH34 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms