Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RPL37P1-201ENST00000432310 284 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RPS6P12-201ENST00000432491 726 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RPS3AP54-201ENST00000435535 734 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CDY12P-201ENST00000440679 1015 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CDY13P-201ENST00000445813 1015 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CDY23P-201ENST00000451661 1014 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL32P14-201ENST00000463196 378 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC022034.3-201ENST00000471393 478 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL21P47-201ENST00000483696 477 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC110792.2-201ENST00000510278 224 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RNU6-334P-201ENST00000517072 102 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AP003717.3-201ENST00000544832 1180 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 SERPINE4P-201ENST00000554978 281 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AL049830.4-201ENST00000555149 351 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC095057.3-201ENST00000567102 1157 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 TMF1P1-201ENST00000576058 373 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SL176P-201ENST00000580352 264 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC124283.4-201ENST00000581815 456 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC245100.7-201ENST00000609678 442 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AC090506.2-201ENST00000624521 419 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 AL122126.1-201ENST00000546905 1318 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA1Q9Y5H4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 MIR383-201ENST00000362257 73 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 SNORA63.3-201ENST00000362682 132 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SKP44-201ENST00000363602 316 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 ATF1P1-201ENST00000406040 927 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SKP199-201ENST00000410325 305 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL23AP38-201ENST00000423801 469 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 MTCO1P43-201ENST00000431831 488 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC092170.1-201ENST00000440211 356 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 HMGB1P48-201ENST00000446155 598 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC073587.1-201ENST00000447093 876 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 ISCUP1-201ENST00000454451 448 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC022795.1-201ENST00000473808 480 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC104629.1-201ENST00000494226 508 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 ARL4AP1-201ENST00000503220 705 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC112518.2-201ENST00000508565 425 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP303-201ENST00000516192 130 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 MTCO1P49-201ENST00000523429 802 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AL442163.2-201ENST00000553912 710 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC069304.3-201ENST00000603938 1084 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC113403.1-201ENST00000604910 193 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 uc_338.13-201ENST00000618243 179 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 AL138960.2-201ENST00000625145 535 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 DDX18P5-201ENST00000534547 1306 ntBASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHGA1Q9Y5H4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC107068.1-201ENST00000563286 4218 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AP002784.2-201ENST00000397300 549 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 ARL4AP5-201ENST00000404372 599 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 U3.35-201ENST00000408405 208 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 RNU6-628P-201ENST00000410675 107 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms