Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PLGLA-201ENST00000465668 449 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 AC108941.1-201ENST00000502853 530 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC7Q96M83 SUMO2P4-201ENST00000504193 276 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 AC004069.2-201ENST00000505438 1114 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 SUMO2P20-201ENST00000520803 283 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC7Q96M83 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC7Q96M83 HMGB1P50-201ENST00000605814 607 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 U3.45-201ENST00000607547 219 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 RNU6-84P-201ENST00000607737 102 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 NF1P10-201ENST00000613227 742 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 AC026368.1-201ENST00000614934 690 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 AC016957.2-201ENST00000616998 848 ntBASIC5.25□□□□□ -1.57
CCDC7Q96M83 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC7Q96M83 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 CR382285.2-201ENST00000624662 1495 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 AL049781.1-201ENST00000623195 3585 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 ZNF602P-201ENST00000405929 924 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 RNU2-65P-201ENST00000410162 185 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 AL591419.1-201ENST00000427423 339 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 UBE2V2P1-201ENST00000434717 398 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 AC016687.1-201ENST00000482574 353 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC7Q96M83 SCARNA13-201ENST00000516672 275 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 AP001542.1-201ENST00000591314 200 ntBASIC5.24□□□□□ -1.57
CCDC7Q96M83 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC7Q96M83 AC032011.1-201ENST00000611703 1549 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 AC093535.2-201ENST00000624769 2326 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC7Q96M83 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 ZNF603P-201ENST00000405613 487 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 MTND2P15-201ENST00000418575 892 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 AL390879.2-203ENST00000426943 1121 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC7Q96M83 NDUFB1P1-201ENST00000435191 180 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 RN7SL93P-201ENST00000463035 293 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 CAB39P1-201ENST00000502277 460 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 HMGN1P15-201ENST00000513870 295 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 AC092747.2-201ENST00000545069 983 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 AC068790.5-201ENST00000602741 355 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC7Q96M83 NCAPGP1-201ENST00000505112 1814 ntBASIC5.23□□□□□ -1.57
CCDC7Q96M83 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 AC116158.1-201ENST00000560231 2129 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 AC093909.5-201ENST00000621839 1799 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 RPS29P4-201ENST00000414733 161 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 AC018635.1-201ENST00000468292 1030 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 SNORA70.24-201ENST00000517233 118 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 OR10D4P-201ENST00000525892 951 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 AC092354.2-201ENST00000607786 514 ntBASIC5.22□□□□□ -1.57
CCDC7Q96M83 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC7Q96M83 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC7Q96M83 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC7Q96M83 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC7Q96M83 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 MOB1AP1-201ENST00000430903 535 ntBASIC5.21□□□□□ -1.58
CCDC7Q96M83 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms