Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EFNB3Q15768 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EFNB3Q15768 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
EFNB3Q15768 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EFNB3Q15768 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
EFNB3Q15768 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
EFNB3Q15768 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EFNB3Q15768 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.24□□□□□ -1.73
EFNB3Q15768 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 SMG1P4-204ENST00000523028 4131 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 FAM3C2-201ENST00000312214 681 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 RNU6-582P-201ENST00000362989 107 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 AL133264.1-201ENST00000407157 562 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 RNA5SP113-201ENST00000410486 84 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AL161449.1-201ENST00000414531 1199 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC008072.1-201ENST00000434254 824 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AL354941.1-201ENST00000438600 464 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 CYCSP24-201ENST00000445119 316 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 RPS29P22-201ENST00000472363 168 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC126121.1-201ENST00000482313 553 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 ACTG1P13-201ENST00000486987 1043 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 PGBD4P4-201ENST00000509673 613 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.23□□□□□ -1.73
EFNB3Q15768 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AP001189.2-201ENST00000527320 189 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.23□□□□□ -1.73
EFNB3Q15768 HIGD1AP17-201ENST00000554576 276 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC068446.3-201ENST00000555285 382 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC090888.1-201ENST00000561335 1141 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 UBE2FP2-201ENST00000566646 462 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC004223.2-201ENST00000590309 544 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC121247.2-201ENST00000604776 136 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AL592221.1-201ENST00000605266 382 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AL391358.1-201ENST00000605342 190 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC090948.2-201ENST00000607363 564 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC131235.4-201ENST00000609288 620 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 AL049794.2-201ENST00000616301 365 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC019206.1-201ENST00000621938 425 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC007671.2-201ENST00000637344 619 ntBASIC4.23□□□□□ -1.73
EFNB3Q15768 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
EFNB3Q15768 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EFNB3Q15768 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.22□□□□□ -1.73
EFNB3Q15768 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.22□□□□□ -1.73
EFNB3Q15768 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
EFNB3Q15768 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
EFNB3Q15768 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
EFNB3Q15768 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.22□□□□□ -1.73
EFNB3Q15768 AL731532.2-201ENST00000623542 1953 ntBASIC4.22□□□□□ -1.73
EFNB3Q15768 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.22□□□□□ -1.73
EFNB3Q15768 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EFNB3Q15768 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.22□□□□□ -1.73
EFNB3Q15768 IL6STP1-201ENST00000346911 1020 ntBASIC4.22□□□□□ -1.73
EFNB3Q15768 RNU5D-1-201ENST00000363299 116 ntBASIC4.22□□□□□ -1.73
EFNB3Q15768 RNU6-621P-201ENST00000364752 109 ntBASIC4.22□□□□□ -1.73
EFNB3Q15768 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EFNB3Q15768 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EFNB3Q15768 SNORD116-23-201ENST00000384645 92 ntBASIC4.22□□□□□ -1.73
EFNB3Q15768 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
EFNB3Q15768 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.22□□□□□ -1.73
EFNB3Q15768 SKINT1L-201ENST00000401057 817 ntBASIC4.22□□□□□ -1.73
EFNB3Q15768 U3.32-201ENST00000408116 212 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms