Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP002791.1-201ENST00000623291 381 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 OR2L1P-202ENST00000641567 1023 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLDN20P56880 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 SMG1P6-201ENST00000532337 2930 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL442639.1-201ENST00000625030 1899 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN20P56880 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 KPNA2P2-201ENST00000419546 1489 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 AL355852.1-201ENST00000454081 1771 ntBASIC4.3□□□□□ -1.72
CLDN20P56880 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN20P56880 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 MAPK10-263ENST00000641052 4307 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 snoZ40.1-201ENST00000364540 72 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 RNVU1-6-201ENST00000364688 164 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 RNU6-619P-201ENST00000365146 108 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 SNORA68.2-201ENST00000391263 128 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 RPL37P18-201ENST00000411602 243 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 BX510359.2-201ENST00000417920 305 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 ELOCP9-201ENST00000418624 239 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 RGS17P1-201ENST00000423358 553 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 TMX2P1-201ENST00000436507 708 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 MTCYBP31-201ENST00000438855 1122 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC006967.1-201ENST00000467608 589 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC011005.3-201ENST00000491624 395 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC008494.2-201ENST00000514544 370 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 MYL12AP1-201ENST00000518490 515 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 MTND2P38-201ENST00000522536 667 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 AL442163.2-201ENST00000553912 710 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC091057.2-201ENST00000602594 792 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AP004247.3-201ENST00000608682 624 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AC092106.3-201ENST00000611308 722 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 Z99129.2-201ENST00000619967 314 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN20P56880 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN20P56880 AL353743.4-201ENST00000422653 1547 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 AP000756.2-201ENST00000624168 2567 ntBASIC4.29□□□□□ -1.72
CLDN20P56880 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN20P56880 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 Z98755.1-201ENST00000407015 1384 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLDN20P56880 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN20P56880 AP005901.5-201ENST00000545779 1796 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 AL590240.1-201ENST00000334118 313 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 NACA3P-201ENST00000359690 648 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 MTND4P13-201ENST00000402078 1023 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 SFR1P1-201ENST00000403720 688 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AC009302.1-201ENST00000417147 390 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms