Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PSMC1P13-201ENST00000458195 985 ntBASIC3.83□□□□□ -1.8
HTTP42858 AC112198.1-201ENST00000505369 1220 ntBASIC3.83□□□□□ -1.8
HTTP42858 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.83□□□□□ -1.8
HTTP42858 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HTTP42858 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HTTP42858 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HTTP42858 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
HTTP42858 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
HTTP42858 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HTTP42858 VN1R8P-201ENST00000407739 893 ntBASIC3.82□□□□□ -1.8
HTTP42858 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.82□□□□□ -1.8
HTTP42858 AL139132.1-201ENST00000431587 344 ntBASIC3.82□□□□□ -1.8
HTTP42858 RPS3AP43-201ENST00000479743 781 ntBASIC3.82□□□□□ -1.8
HTTP42858 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
HTTP42858 TRAV15-201ENST00000556680 249 ntBASIC3.82□□□□□ -1.8
HTTP42858 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HTTP42858 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
HTTP42858 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HTTP42858 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC3.82□□□□□ -1.8
HTTP42858 KCTD9P3-201ENST00000434597 1169 ntBASIC3.82□□□□□ -1.8
HTTP42858 PPBPP1-201ENST00000510807 373 ntBASIC3.82□□□□□ -1.8
HTTP42858 SUMO2P20-201ENST00000520803 283 ntBASIC3.82□□□□□ -1.8
HTTP42858 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.82□□□□□ -1.8
HTTP42858 AC004024.1-201ENST00000549244 247 ntBASIC3.82□□□□□ -1.8
HTTP42858 GTF3AP2-201ENST00000557014 266 ntBASIC3.82□□□□□ -1.8
HTTP42858 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.82□□□□□ -1.8
HTTP42858 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.82□□□□□ -1.8
HTTP42858 AC128687.2-201ENST00000609657 566 ntBASIC3.82□□□□□ -1.8
HTTP42858 OR5AC4P-202ENST00000642086 985 ntBASIC3.82□□□□□ -1.8
HTTP42858 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HTTP42858 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HTTP42858 AC021755.1-201ENST00000559747 1447 ntBASIC3.82□□□□□ -1.8
HTTP42858 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HTTP42858 AL645568.2-201ENST00000432815 1337 ntBASIC3.82□□□□□ -1.8
HTTP42858 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HTTP42858 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.81□□□□□ -1.8
HTTP42858 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
HTTP42858 RNA5SP356-201ENST00000515972 94 ntBASIC3.81□□□□□ -1.8
HTTP42858 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HTTP42858 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.81□□□□□ -1.8
HTTP42858 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HTTP42858 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HTTP42858 MIR1261-201ENST00000408659 82 ntBASIC3.81□□□□□ -1.8
HTTP42858 AC108734.1-201ENST00000439549 399 ntBASIC3.81□□□□□ -1.8
HTTP42858 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HTTP42858 NDUFB9P3-201ENST00000521269 501 ntBASIC3.81□□□□□ -1.8
HTTP42858 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.81□□□□□ -1.8
HTTP42858 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.81□□□□□ -1.8
HTTP42858 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HTTP42858 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
HTTP42858 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HTTP42858 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.81□□□□□ -1.8
HTTP42858 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.81□□□□□ -1.8
HTTP42858 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.81□□□□□ -1.8
HTTP42858 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
HTTP42858 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.81□□□□□ -1.8
HTTP42858 FTH1P1-201ENST00000437933 532 ntBASIC3.81□□□□□ -1.8
HTTP42858 AC006028.1-201ENST00000438379 402 ntBASIC3.81□□□□□ -1.8
HTTP42858 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.81□□□□□ -1.8
HTTP42858 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.81□□□□□ -1.8
HTTP42858 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.81□□□□□ -1.8
HTTP42858 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HTTP42858 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HTTP42858 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
HTTP42858 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.8□□□□□ -1.8
HTTP42858 DEFB109A-201ENST00000482450 265 ntBASIC3.8□□□□□ -1.8
HTTP42858 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.8□□□□□ -1.8
HTTP42858 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.8□□□□□ -1.8
HTTP42858 AL359219.2-201ENST00000555184 348 ntBASIC3.8□□□□□ -1.8
HTTP42858 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.8□□□□□ -1.8
HTTP42858 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HTTP42858 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 ASNSP3-201ENST00000451989 1306 ntBASIC3.8□□□□□ -1.8
HTTP42858 RSL24D1P1-201ENST00000404972 493 ntBASIC3.8□□□□□ -1.8
HTTP42858 NUP35P1-201ENST00000422734 947 ntBASIC3.8□□□□□ -1.8
HTTP42858 RPS20P1-201ENST00000434853 354 ntBASIC3.8□□□□□ -1.8
HTTP42858 AF228730.2-201ENST00000438784 848 ntBASIC3.8□□□□□ -1.8
HTTP42858 RN7SL585P-201ENST00000470538 280 ntBASIC3.8□□□□□ -1.8
HTTP42858 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.8□□□□□ -1.8
HTTP42858 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.8□□□□□ -1.8
HTTP42858 snoU109.6-201ENST00000516831 118 ntBASIC3.8□□□□□ -1.8
HTTP42858 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
HTTP42858 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.8□□□□□ -1.8
HTTP42858 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.8□□□□□ -1.8
HTTP42858 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HTTP42858 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
HTTP42858 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.8□□□□□ -1.8
HTTP42858 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HTTP42858 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
HTTP42858 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 RNU1-18P-201ENST00000363062 164 ntBASIC3.79□□□□□ -1.8
HTTP42858 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 DYNLL1P7-201ENST00000429273 258 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms