Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC018638.7-201ENST00000605836 1114 ntBASIC4.83□□□□□ -1.64
PCDH17O14917 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDH17O14917 FAM25E-202ENST00000608562 189 ntBASIC4.83□□□□□ -1.64
PCDH17O14917 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC093799.2-201ENST00000610062 578 ntBASIC4.83□□□□□ -1.64
PCDH17O14917 AC009318.3-201ENST00000616916 503 ntBASIC4.83□□□□□ -1.64
PCDH17O14917 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC073348.1-201ENST00000623002 331 ntBASIC4.83□□□□□ -1.64
PCDH17O14917 AC091905.4-201ENST00000623432 202 ntBASIC4.83□□□□□ -1.64
PCDH17O14917 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH17O14917 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH17O14917 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDH17O14917 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH17O14917 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH17O14917 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH17O14917 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 AC011447.7-201ENST00000624228 1590 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 IL6STP1-201ENST00000346911 1020 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 RNA5SP223-201ENST00000365174 120 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH17O14917 SNORD116-2-201ENST00000384274 95 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 SNORD116-6-201ENST00000384711 96 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 FCF1P2-201ENST00000415284 583 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AC092634.6-201ENST00000418558 192 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AL590609.2-201ENST00000421430 368 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 MTCO3P1-205ENST00000422088 832 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH17O14917 RPL12P34-201ENST00000424532 479 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 RPL31P54-201ENST00000429803 370 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 AL049745.1-201ENST00000433953 286 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH17O14917 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC108463.1-201ENST00000450258 347 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC092647.2-201ENST00000452998 253 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 AC083982.1-201ENST00000485679 344 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 LINC00888-204ENST00000487386 421 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AC007686.1-201ENST00000488511 463 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 COX6B1P5-201ENST00000509843 249 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 MTCO1P47-201ENST00000523889 1271 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 OR5AZ1P-201ENST00000527448 943 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AC091515.1-201ENST00000548110 679 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC008015.1-201ENST00000555505 465 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AC090515.3-201ENST00000560431 315 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC074051.3-201ENST00000570238 358 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC093765.1-201ENST00000603758 881 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 AC091953.3-201ENST00000623220 236 ntBASIC4.82□□□□□ -1.64
PCDH17O14917 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PCDH17O14917 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
PCDH17O14917 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDH17O14917 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PCDH17O14917 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH17O14917 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH17O14917 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms