Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC135507.1-201ENST00000607214 561 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 RMST_10.1-201ENST00000616309 154 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC007671.2-201ENST00000637344 619 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 CASC19-204ENST00000641001 2055 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 IL6STP1-201ENST00000346911 1020 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RNU6-1005P-201ENST00000384519 107 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RNU4-25P-201ENST00000410569 230 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RNU4-74P-201ENST00000411280 161 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 CYCSP10-201ENST00000417973 294 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RPL12P34-201ENST00000424532 479 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AL157827.1-201ENST00000447622 132 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AL162591.2-201ENST00000449634 317 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RHEBP2-201ENST00000450289 600 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RPL21P6-201ENST00000479171 504 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC098583.1-201ENST00000480875 255 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC091951.3-201ENST00000504093 246 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC093840.1-201ENST00000511599 336 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 RN7SKP122-201ENST00000515923 296 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AP001804.2-201ENST00000533932 910 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 TOMM20P2-201ENST00000540082 421 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC023050.2-201ENST00000544968 387 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AL391156.1-201ENST00000554965 554 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC105129.1-201ENST00000560250 297 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 SUMO2P14-201ENST00000604488 293 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC097505.1-201ENST00000610199 565 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 PART1_2.1-201ENST00000612397 250 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC092159.4-201ENST00000624944 550 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 AC090582.1-201ENST00000636321 199 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 SOCS5P3-201ENST00000425115 1576 ntBASIC4.85□□□□□ -1.63
EBF3Q9H4W6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
EBF3Q9H4W6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 AC104446.1-201ENST00000613728 1321 ntBASIC4.84□□□□□ -1.63
EBF3Q9H4W6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 SNORD96B-201ENST00000386148 79 ntBASIC4.84□□□□□ -1.63
EBF3Q9H4W6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
EBF3Q9H4W6 AL603865.2-201ENST00000401679 213 ntBASIC4.84□□□□□ -1.63
EBF3Q9H4W6 AL592291.1-201ENST00000403830 352 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms