Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 ELF2P3-201ENST00000445099 1506 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 BTBD10P1-201ENST00000549824 1352 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS11Q9H270 SNORA40.2-201ENST00000390847 128 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 OR7E101P-201ENST00000400428 513 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 RN7SKP59-201ENST00000410520 314 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AC211486.3-201ENST00000412694 621 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS11Q9H270 USP9YP18-201ENST00000425912 695 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 RPS26P47-201ENST00000427219 348 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AL450023.1-201ENST00000450868 751 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AC006511.1-201ENST00000470614 315 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 RPL7P6-201ENST00000480903 738 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 HMGB3P13-201ENST00000511263 607 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 RNA5SP228-201ENST00000516232 133 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AC106038.2-201ENST00000520706 568 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AC024405.1-201ENST00000532521 1042 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 HIGD1AP17-201ENST00000554576 276 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AL121655.1-201ENST00000605811 308 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AL159169.3-201ENST00000608871 561 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AC019278.1-201ENST00000623516 479 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 AC129915.3-201ENST00000634128 948 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 CASC19-204ENST00000641001 2055 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS11Q9H270 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS11Q9H270 USP9YP4-201ENST00000424401 1745 ntBASIC5.43□□□□□ -1.54
VPS11Q9H270 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS11Q9H270 AL355852.1-201ENST00000454081 1771 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS11Q9H270 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS11Q9H270 AL512646.1-201ENST00000269395 1077 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS11Q9H270 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS11Q9H270 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 RNA5SP131-201ENST00000365452 119 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS11Q9H270 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS11Q9H270 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS11Q9H270 MIR551A-201ENST00000385042 96 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS11Q9H270 HMGB1P20-201ENST00000402555 677 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 AC138393.2-201ENST00000414742 246 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS11Q9H270 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS11Q9H270 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS11Q9H270 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS11Q9H270 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS11Q9H270 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS11Q9H270 TXNP5-201ENST00000441043 315 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 TRIM60P18-201ENST00000441518 828 ntBASIC5.42□□□□□ -1.54
VPS11Q9H270 AC112653.1-201ENST00000443851 386 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms