Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 HIGD1AP5-201ENST00000529959 259 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 EEF1A1P17-201ENST00000547505 1275 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC092868.1-201ENST00000557949 802 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC138749.2-201ENST00000566048 167 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MIR4682-201ENST00000580643 80 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC090415.1-201ENST00000581877 847 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 OR1M4P-201ENST00000589199 287 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC005518.2-201ENST00000603254 282 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 Z83818.1-201ENST00000603584 150 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC009686.2-201ENST00000607017 577 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MIR6864-201ENST00000617935 70 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC073488.8-201ENST00000631952 757 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MIR3120-201ENST00000636555 81 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AL139384.2-201ENST00000613809 3590 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AL391262.1-201ENST00000556558 1992 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MAPK10-323ENST00000641493 3207 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC091544.5-201ENST00000620192 3815 ntBASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-1Q9BYR8 AC100810.3-201ENST00000633189 2240 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 AL359893.1-201ENST00000447628 1580 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 MAPK10-383ENST00000642032 3390 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 Z75746.1-201ENST00000440243 2080 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 ST7-213ENST00000432298 1956 ntTSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 RN7SKP72-201ENST00000362327 292 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 Y_RNA.27-201ENST00000362540 103 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 Y_RNA.170-201ENST00000363746 110 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 RNU6-682P-201ENST00000363843 106 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 RN7SKP130-201ENST00000364924 301 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 TINAG-202ENST00000370864 692 ntTSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 SNORD73A-201ENST00000386062 65 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 RNU11-4P-201ENST00000391149 133 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 NHP2P2-201ENST00000396362 460 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 AL591034.2-201ENST00000402839 359 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 AL590704.1-201ENST00000402856 794 ntBASIC3.8□□□□□ -1.8
KRTAP3-1Q9BYR8 MIR1204-201ENST00000408388 67 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms