Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 AL121839.2-201ENST00000565058 6943 ntBASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.96□□□□□ -1.62
SSBP3Q9BWW4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL592429.1-201ENST00000403909 1473 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 GTF2IP4-201ENST00000453092 2054 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 UGT2B26P-201ENST00000508672 1613 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 PARP4P2-201ENST00000446672 3326 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 SELENOWP1-201ENST00000322792 252 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RNU6-216P-201ENST00000363282 104 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 Y_RNA.144-201ENST00000363521 113 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RNY3P3-201ENST00000363816 102 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RNA5SP435-201ENST00000364044 108 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RN7SKP128-201ENST00000364270 303 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RNU6-1322P-201ENST00000364309 107 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 Y_RNA.422-201ENST00000384054 114 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 MIR1203-201ENST00000408812 85 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 Y_RNA.608-201ENST00000410647 95 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RNU6-195P-201ENST00000411352 109 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC004987.3-201ENST00000413879 771 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RPL35AP3-201ENST00000414680 288 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 NIPA2P1-201ENST00000426223 976 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC016027.5-201ENST00000427227 210 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 NPM1P34-201ENST00000428821 893 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 GTF2IP20-201ENST00000431663 360 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC109583.1-201ENST00000432156 268 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL445928.1-201ENST00000435545 222 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 BRK1P2-201ENST00000442875 223 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 Z80107.2-201ENST00000445127 392 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 POU5F1P7-201ENST00000508759 541 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC013828.2-201ENST00000532487 235 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CYCSP2-201ENST00000558168 301 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC090651.1-201ENST00000567865 634 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL391646.1-201ENST00000603860 190 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC007621.1-201ENST00000604544 437 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 FAM27E4-201ENST00000605259 342 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL355802.3-201ENST00000607571 545 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL133215.3-201ENST00000609801 448 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AP000550.3-201ENST00000637734 379 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AC119674.1-212ENST00000641155 993 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 LINC00561-201ENST00000565815 2738 ntBASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSBP3Q9BWW4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms