Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.18□□□□□ -1.58
NEK3P51956 OR5AZ1P-201ENST00000527448 943 ntBASIC5.18□□□□□ -1.58
NEK3P51956 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.18□□□□□ -1.58
NEK3P51956 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 TRAV15-201ENST00000556680 249 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AC138915.2-201ENST00000569776 97 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.18□□□□□ -1.58
NEK3P51956 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 AC113194.1-201ENST00000606037 500 ntBASIC5.18□□□□□ -1.58
NEK3P51956 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 AC092954.1-201ENST00000609121 445 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AC079395.3-201ENST00000615161 484 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AC009464.1-201ENST00000615731 469 ntBASIC5.18□□□□□ -1.58
NEK3P51956 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.18□□□□□ -1.58
NEK3P51956 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.18□□□□□ -1.58
NEK3P51956 MIR4278-201ENST00000636094 69 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AF001550.2-201ENST00000636643 217 ntBASIC5.18□□□□□ -1.58
NEK3P51956 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.18□□□□□ -1.58
NEK3P51956 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NEK3P51956 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
NEK3P51956 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.17□□□□□ -1.58
NEK3P51956 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.17□□□□□ -1.58
NEK3P51956 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NEK3P51956 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 AC090229.1-201ENST00000590983 1609 ntBASIC5.17□□□□□ -1.58
NEK3P51956 RNU6-621P-201ENST00000364752 109 ntBASIC5.17□□□□□ -1.58
NEK3P51956 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NEK3P51956 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NEK3P51956 MIR550A3-201ENST00000390735 95 ntBASIC5.17□□□□□ -1.58
NEK3P51956 GLULP6-201ENST00000399502 913 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AL078599.1-201ENST00000402075 293 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AL023807.1-201ENST00000407932 359 ntBASIC5.17□□□□□ -1.58
NEK3P51956 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.17□□□□□ -1.58
NEK3P51956 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.17□□□□□ -1.58
NEK3P51956 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 VDAC1P6-201ENST00000430062 855 ntBASIC5.17□□□□□ -1.58
NEK3P51956 HIGD1AP4-201ENST00000430194 280 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 KNOP1P3-201ENST00000446933 426 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.17□□□□□ -1.58
NEK3P51956 SBDSP1-204ENST00000453858 737 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AL356981.1-201ENST00000454879 684 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC013828.1-201ENST00000481845 158 ntBASIC5.17□□□□□ -1.58
NEK3P51956 HMGN2P25-201ENST00000486956 268 ntBASIC5.17□□□□□ -1.58
NEK3P51956 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.17□□□□□ -1.58
NEK3P51956 AC073073.1-201ENST00000493920 463 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC116353.3-201ENST00000511215 249 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.17□□□□□ -1.58
NEK3P51956 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.17□□□□□ -1.58
NEK3P51956 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.17□□□□□ -1.58
NEK3P51956 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.17□□□□□ -1.58
NEK3P51956 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
NEK3P51956 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
NEK3P51956 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NEK3P51956 HIGD1AP17-201ENST00000554576 276 ntBASIC5.17□□□□□ -1.58
NEK3P51956 CENPUP2-201ENST00000555897 1186 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AGGF1P8-201ENST00000562979 1000 ntBASIC5.17□□□□□ -1.58
NEK3P51956 MIR4458-201ENST00000578872 75 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC107982.3-201ENST00000584957 985 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC245036.5-201ENST00000596330 847 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC007566.2-201ENST00000603642 413 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC133552.5-201ENST00000604266 540 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC024940.4-201ENST00000605507 246 ntBASIC5.17□□□□□ -1.58
NEK3P51956 HSPE1P14-201ENST00000605812 302 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC105429.2-201ENST00000610567 517 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC092106.3-201ENST00000611308 722 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.17□□□□□ -1.58
NEK3P51956 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.17□□□□□ -1.58
NEK3P51956 AC022106.2-201ENST00000620114 757 ntBASIC5.17□□□□□ -1.58
NEK3P51956 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NEK3P51956 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NEK3P51956 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NEK3P51956 AC053481.2-202ENST00000582394 1500 ntBASIC5.17□□□□□ -1.58
NEK3P51956 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEK3P51956 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEK3P51956 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NEK3P51956 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
NEK3P51956 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NEK3P51956 AC005539.1-201ENST00000443768 1479 ntBASIC5.16□□□□□ -1.58
NEK3P51956 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms