Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC007494.3-201ENST00000624660 743 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AL356121.2-201ENST00000624715 780 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC091965.5-201ENST00000624785 342 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 LINC01808-202ENST00000641680 1116 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 AL929601.4-201ENST00000613011 1341 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 CPHL1P-201ENST00000461341 3407 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
POLR2AP24928 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 TCP11X1-202ENST00000622971 1372 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.3□□□□□ -1.56
POLR2AP24928 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
POLR2AP24928 AL590762.2-201ENST00000395798 571 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AC097374.1-203ENST00000400783 485 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AL590084.1-201ENST00000407885 387 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 SETP15-201ENST00000412724 337 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.3□□□□□ -1.56
POLR2AP24928 AL157831.1-201ENST00000426134 473 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.3□□□□□ -1.56
POLR2AP24928 MTND3P5-201ENST00000512798 333 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 SNORA67.7-201ENST00000516664 135 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.3□□□□□ -1.56
POLR2AP24928 AP003730.1-201ENST00000524605 285 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 OR5BC1P-201ENST00000529327 739 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.3□□□□□ -1.56
POLR2AP24928 FKBP1BP1-201ENST00000553366 325 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AC040958.1-201ENST00000561102 201 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AL139286.2-201ENST00000606838 396 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 AC020634.1-201ENST00000608701 549 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 MIR6891-201ENST00000618788 93 ntBASIC5.3□□□□□ -1.56
POLR2AP24928 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
POLR2AP24928 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
POLR2AP24928 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.3□□□□□ -1.56
POLR2AP24928 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 FAM133CP-201ENST00000332869 704 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.29□□□□□ -1.56
POLR2AP24928 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.29□□□□□ -1.56
POLR2AP24928 RN7SKP235-201ENST00000410662 305 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.29□□□□□ -1.56
POLR2AP24928 OR5BE1P-201ENST00000425977 939 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 GTF2IP3-201ENST00000433887 494 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC079804.1-201ENST00000461922 436 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.29□□□□□ -1.56
POLR2AP24928 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.29□□□□□ -1.56
POLR2AP24928 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC022662.1-201ENST00000580252 331 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AC107982.3-201ENST00000584957 985 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AC113403.1-201ENST00000604910 193 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 MIR6875-201ENST00000617506 72 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 OR5BE1P-202ENST00000641168 1176 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.29□□□□□ -1.56
POLR2AP24928 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
POLR2AP24928 SNORA71.3-201ENST00000362582 128 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 MIR670-201ENST00000390142 98 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 Z98745.1-201ENST00000402553 494 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 RNU4-72P-201ENST00000410754 173 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 BTF3L4P1-201ENST00000413813 468 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 RPL6P29-201ENST00000414863 865 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 PTP4A1P5-201ENST00000420305 455 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AC114495.1-201ENST00000441274 436 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 HMGB1P48-201ENST00000446155 598 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 RPL7L1P8-201ENST00000469911 741 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 SYPL1P1-201ENST00000473622 768 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC109464.2-201ENST00000510242 943 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC104417.1-201ENST00000523974 751 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.29□□□□□ -1.56
POLR2AP24928 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.29□□□□□ -1.56
POLR2AP24928 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.29□□□□□ -1.56
POLR2AP24928 AGGF1P4-201ENST00000568249 801 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms