Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 AC027243.2-201ENST00000602530 724 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AL049634.3-201ENST00000604968 457 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AC010632.3-201ENST00000611377 369 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AL592295.2-201ENST00000612578 206 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AC005332.6-201ENST00000613178 446 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AL139089.1-201ENST00000620372 975 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 AC119674.1-212ENST00000641155 993 ntBASIC6.47□□□□□ -1.37
LIG1P18858 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LIG1P18858 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.46□□□□□ -1.37
LIG1P18858 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.46□□□□□ -1.37
LIG1P18858 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
LIG1P18858 CASC19-280ENST00000642102 1351 ntBASIC6.46□□□□□ -1.37
LIG1P18858 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
LIG1P18858 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LIG1P18858 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LIG1P18858 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.46□□□□□ -1.37
LIG1P18858 BCORP1-203ENST00000513194 5093 ntBASIC6.46□□□□□ -1.38
LIG1P18858 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIG1P18858 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LIG1P18858 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LIG1P18858 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIG1P18858 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIG1P18858 RNU6-433P-201ENST00000363216 104 ntBASIC6.46□□□□□ -1.38
LIG1P18858 RNU6-839P-201ENST00000363347 108 ntBASIC6.46□□□□□ -1.38
LIG1P18858 RNA5SP500-201ENST00000364486 119 ntBASIC6.46□□□□□ -1.38
LIG1P18858 RNU6-98P-201ENST00000384173 107 ntBASIC6.46□□□□□ -1.38
LIG1P18858 SNORA5.1-201ENST00000384275 131 ntBASIC6.46□□□□□ -1.38
LIG1P18858 MTCYBP36-201ENST00000404146 440 ntBASIC6.46□□□□□ -1.38
LIG1P18858 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 CYP1D1P-201ENST00000416662 1433 ntBASIC6.46□□□□□ -1.38
LIG1P18858 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 USP9YP13-201ENST00000417797 480 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.46□□□□□ -1.38
LIG1P18858 LINC00993-201ENST00000420453 540 ntBASIC6.46□□□□□ -1.38
LIG1P18858 TIMM9P3-201ENST00000428659 274 ntBASIC6.46□□□□□ -1.38
LIG1P18858 SKP1P3-201ENST00000429280 487 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.46□□□□□ -1.38
LIG1P18858 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIG1P18858 PPIAP17-201ENST00000438507 471 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.46□□□□□ -1.38
LIG1P18858 OR7E125P-201ENST00000443450 846 ntBASIC6.46□□□□□ -1.38
LIG1P18858 LINC02210-201ENST00000444561 288 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 AC104306.1-201ENST00000449702 371 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.46□□□□□ -1.38
LIG1P18858 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 RN7SL188P-201ENST00000469842 285 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 AC099521.1-201ENST00000482557 334 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 AC104109.1-201ENST00000498563 436 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 AC011352.3-201ENST00000505162 593 ntBASIC6.46□□□□□ -1.38
LIG1P18858 RNU6-358P-201ENST00000516564 75 ntBASIC6.46□□□□□ -1.38
LIG1P18858 PAICSP4-201ENST00000517543 1253 ntBASIC6.46□□□□□ -1.38
LIG1P18858 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.46□□□□□ -1.38
LIG1P18858 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 AC239860.2-201ENST00000525886 270 ntBASIC6.46□□□□□ -1.38
LIG1P18858 OR5AQ1P-201ENST00000527596 927 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.46□□□□□ -1.38
LIG1P18858 UBE2V2P2-201ENST00000587677 504 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.46□□□□□ -1.38
LIG1P18858 COX6CP7-201ENST00000597056 208 ntBASIC6.46□□□□□ -1.38
LIG1P18858 DUXAP4-201ENST00000603046 613 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIG1P18858 AC008536.2-201ENST00000607284 349 ntBASIC6.46□□□□□ -1.38
LIG1P18858 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC027807.2-201ENST00000616099 408 ntBASIC6.46□□□□□ -1.38
LIG1P18858 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 AC092650.2-201ENST00000619984 902 ntBASIC6.46□□□□□ -1.38
LIG1P18858 AC112204.3-201ENST00000623822 332 ntBASIC6.46□□□□□ -1.38
LIG1P18858 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.46□□□□□ -1.38
LIG1P18858 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.46□□□□□ -1.38
LIG1P18858 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms