Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1BO75841 PCNAP1-202ENST00000595299 752 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC113403.1-201ENST00000604910 193 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.37□□□□□ -1.87
UPK1BO75841 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1BO75841 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
UPK1BO75841 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1BO75841 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
UPK1BO75841 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1BO75841 AC116667.1-201ENST00000604855 2072 ntBASIC3.37□□□□□ -1.87
UPK1BO75841 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
UPK1BO75841 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.36□□□□□ -1.87
UPK1BO75841 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
UPK1BO75841 U3.15-201ENST00000365398 212 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.36□□□□□ -1.87
UPK1BO75841 HMGB3P19-201ENST00000403971 560 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC099535.1-201ENST00000408928 371 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 AC004022.2-201ENST00000413824 193 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC004987.3-201ENST00000413879 771 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1BO75841 RPL7AP25-201ENST00000423357 805 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AL031736.2-201ENST00000426573 787 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 snoU13.20-201ENST00000459180 104 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 RPL7P1-201ENST00000468161 747 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 RPL7P9-201ENST00000468715 747 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 RN7SL174P-201ENST00000475578 289 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC084198.1-201ENST00000477747 402 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 RPL23AP73-201ENST00000492507 471 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 PFN1P8-201ENST00000497012 543 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 MTCO1P31-201ENST00000506355 492 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC010285.3-201ENST00000511668 676 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC008802.1-201ENST00000519121 791 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 OR4A2P-201ENST00000527276 913 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 OR5D15P-201ENST00000531671 942 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1BO75841 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.36□□□□□ -1.87
UPK1BO75841 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1BO75841 MIR3667-201ENST00000581025 74 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1BO75841 AP001180.3-201ENST00000582221 145 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 AL137849.1-201ENST00000604767 169 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC010680.4-201ENST00000605334 543 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 AC011816.2-201ENST00000607089 556 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 FAM27D1-201ENST00000612308 341 ntBASIC3.36□□□□□ -1.87
UPK1BO75841 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1BO75841 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1BO75841 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.36□□□□□ -1.87
UPK1BO75841 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
UPK1BO75841 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1BO75841 RNU4-4P-201ENST00000364588 130 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 RNU1-106P-201ENST00000384382 164 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1BO75841 RANP4-201ENST00000413361 655 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 AL445528.1-201ENST00000426330 420 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.35□□□□□ -1.87
UPK1BO75841 RPL23AP1-201ENST00000428990 471 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.35□□□□□ -1.87
UPK1BO75841 RPL31P44-201ENST00000447680 377 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 AURKAPS1-201ENST00000451805 1212 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 RPL12P26-201ENST00000452430 487 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 RPS4XP2-201ENST00000458402 793 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 NDUFA5P5-201ENST00000468361 342 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 AC109462.1-201ENST00000491087 368 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1BO75841 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.35□□□□□ -1.87
UPK1BO75841 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 IGKV2-36-201ENST00000519999 223 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.35□□□□□ -1.87
UPK1BO75841 AP002812.4-201ENST00000532139 286 ntBASIC3.35□□□□□ -1.87
UPK1BO75841 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
UPK1BO75841 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1BO75841 AP000919.1-202ENST00000581139 1264 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms