Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 AC145423.1-201ENST00000605712 336 ntBASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 LINC02019-201ENST00000608605 2060 ntBASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VPS9D1Q9Y2B5 AC006116.1-201ENST00000587908 2171 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 CASC19-284ENST00000642142 1868 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AL162171.3-201ENST00000617439 3178 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 MIR411-201ENST00000362239 96 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 Y_RNA.105-201ENST00000363182 111 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-1059P-201ENST00000363752 98 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-293P-201ENST00000411259 106 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 BX682237.1-201ENST00000415016 335 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 NMD3P2-201ENST00000421815 761 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 ELOBP4-201ENST00000423418 296 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AL121916.1-201ENST00000429405 308 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC091286.1-201ENST00000431233 461 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 ANXA2P2-201ENST00000435128 1020 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RPL23AP74-201ENST00000437246 471 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 OR2AQ1P-201ENST00000451972 200 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RPS15AP1-201ENST00000457423 391 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC116533.1-201ENST00000459748 321 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL815P-201ENST00000470970 290 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RPL17P19-201ENST00000489069 552 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AP002812.1-201ENST00000495378 474 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 TBCAP3-201ENST00000512475 312 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 RNU2-10P-201ENST00000516375 211 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 COX6B1P6-201ENST00000522347 255 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC024405.2-202ENST00000532731 184 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 ATP5J2P4-201ENST00000538774 267 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC008687.2-201ENST00000597865 520 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AL390123.1-201ENST00000603216 237 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC116165.3-201ENST00000614524 400 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC025034.2-201ENST00000623264 286 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AP000843.1-201ENST00000624880 701 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC009313.2-201ENST00000417893 1941 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 SALL4P7-201ENST00000555779 3120 ntBASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
VPS9D1Q9Y2B5 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 MARK2P4-201ENST00000503381 2380 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 Y_RNA.183-201ENST00000363882 113 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 SNORA51.7-201ENST00000384171 134 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-611P-201ENST00000384276 104 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-417P-201ENST00000384712 107 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 MIR320B1-201ENST00000390209 79 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-1055P-201ENST00000391085 107 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 EIF5P1-201ENST00000400019 1231 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-1156P-201ENST00000410365 100 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 AC017104.2-201ENST00000417000 321 ntBASIC7.19□□□□□ -1.26
VPS9D1Q9Y2B5 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms