Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CHD7Q9P2D1 AC005002.1-201ENST00000447458 540 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AC073657.2-201ENST00000605661 303 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 MIR7851-201ENST00000610611 160 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 RNA5SP197-201ENST00000363357 119 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 RPL21P7-201ENST00000557463 483 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AC092868.3-201ENST00000560515 784 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AC005831.1-201ENST00000624384 1697 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 VN1R8P-201ENST00000407739 893 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 RNU6-579P-201ENST00000516879 102 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AC087276.1-201ENST00000529659 480 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
CHD7Q9P2D1 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD7Q9P2D1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 RNA5SP229-201ENST00000410809 99 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 Z99755.1-201ENST00000414048 380 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC008885.1-201ENST00000514930 301 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AL691447.1-201ENST00000419456 387 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 BX842559.1-201ENST00000419615 532 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AL121890.1-201ENST00000435457 205 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 RN7SKP46-201ENST00000515942 234 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC091544.4-201ENST00000555268 342 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC015802.5-201ENST00000607478 399 ntBASIC3.68□□□□□ -1.82
CHD7Q9P2D1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CHD7Q9P2D1 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 U3.39-201ENST00000408569 239 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 OR5AW1P-201ENST00000426334 1006 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 DNAJC19P8-201ENST00000452887 259 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 MRPL35P4-201ENST00000453682 566 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 PSMC1P13-201ENST00000458195 985 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 LSM3P2-201ENST00000551246 273 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 TRAV15-201ENST00000556680 249 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC068020.1-201ENST00000594215 661 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC015871.5-202ENST00000623252 701 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 RN7SKP111-201ENST00000410349 271 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC090877.1-201ENST00000561418 344 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 BDH2P1-201ENST00000602288 736 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC136601.2-201ENST00000604356 474 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 IGHV3-29-201ENST00000604817 344 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 AC128687.2-201ENST00000609657 566 ntBASIC3.67□□□□□ -1.82
CHD7Q9P2D1 BMS1P21-201ENST00000634565 365 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms