Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC011242.1-201ENST00000433596 1158 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 HMGB1P45-201ENST00000435986 653 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC114495.1-201ENST00000441274 436 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 ARL4AP3-201ENST00000441452 574 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 RPS29P22-201ENST00000472363 168 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 RPS27P23-201ENST00000487608 251 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC093801.2-201ENST00000503966 1050 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 RN7SKP92-201ENST00000517266 244 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 SOD1P3-201ENST00000518682 454 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC234771.5-201ENST00000600161 514 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 Z98200.1-201ENST00000607298 470 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 VN1R74P-201ENST00000613259 503 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 FAM157B-203ENST00000639350 358 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 SGO1P1-201ENST00000603525 1447 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-236P-201ENST00000363886 106 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 MTCO2P31-201ENST00000402702 684 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 RPL7P27-201ENST00000403775 720 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 RPL26P29-201ENST00000415623 438 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 RPL23AP25-201ENST00000430973 463 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC008427.1-201ENST00000503102 655 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AK3P4-201ENST00000504283 583 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC021146.3-201ENST00000511911 260 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 RNA5SP497-201ENST00000516081 97 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-416P-201ENST00000516265 103 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC124068.1-201ENST00000563131 678 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC073429.2-201ENST00000569694 1444 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 MTCO1P40-201ENST00000574371 625 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC010680.4-201ENST00000605334 543 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC099785.1-201ENST00000605697 437 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC026979.4-201ENST00000606555 645 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 AL121594.5-201ENST00000631724 573 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 NOL8P1-201ENST00000508336 3529 ntBASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
BLOC1S4Q9NUP1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms