Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 HMGB1P10-201ENST00000395823 563 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 RNU4-25P-201ENST00000410569 230 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 RNA5SP498-201ENST00000411342 120 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC007390.1-201ENST00000415722 356 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 MTND2P15-201ENST00000418575 892 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL031736.2-201ENST00000426573 787 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 RPL23AP1-201ENST00000428990 471 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 ARF4P2-201ENST00000430209 526 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL358472.1-201ENST00000431295 329 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 CYCSP43-201ENST00000438233 310 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC073264.2-201ENST00000448886 166 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 BUD31P2-201ENST00000449374 300 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL513533.1-201ENST00000453728 415 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC018638.3-201ENST00000461273 132 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC074386.1-201ENST00000476560 767 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL049830.2-201ENST00000480072 201 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 RPS4XP14-201ENST00000493072 781 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 RN7SL691P-201ENST00000494487 301 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC105233.1-201ENST00000498840 781 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC008958.1-201ENST00000511047 682 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 RN7SKP92-201ENST00000517266 244 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC010476.1-201ENST00000519111 851 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC114878.2-201ENST00000604863 1251 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AC124312.6-202ENST00000623624 418 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 AL139254.3-201ENST00000641097 674 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 LINC00561-201ENST00000565815 2738 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.26□□□□□ -1.89
CTNNBIP1Q9NSA3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 HMGN2P8-201ENST00000391458 268 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 RPL7AP73-201ENST00000413490 353 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC004987.3-201ENST00000413879 771 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 CHIAP3-201ENST00000423668 1133 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 IFNNP1-201ENST00000429219 553 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 RPS29P17-201ENST00000430795 166 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 HMGB1P37-201ENST00000439613 609 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 TPMTP4-201ENST00000450749 678 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC009963.2-201ENST00000453431 138 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC078918.1-201ENST00000498515 228 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 CDH12P2-201ENST00000504393 298 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC004069.2-201ENST00000505438 1114 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC005921.1-201ENST00000510589 286 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 KRT19P6-201ENST00000510983 209 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC099522.1-202ENST00000514718 367 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 MIR4480-201ENST00000582492 71 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC121761.2-201ENST00000617300 689 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AL139089.1-201ENST00000620372 975 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 AC091953.3-201ENST00000623220 236 ntBASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNBIP1Q9NSA3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms