Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU6-582P-201ENST00000362989 107 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AL139098.1-201ENST00000407291 389 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 RNU6-757P-201ENST00000410334 100 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 RN7SKP125-201ENST00000410481 302 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 CTSL3P-202ENST00000412179 788 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC234781.2-201ENST00000426370 994 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 RBMY2QP-201ENST00000429799 1147 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC093414.1-201ENST00000434712 514 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 YWHAZP7-201ENST00000436906 631 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AL354941.1-201ENST00000438600 464 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.43□□□□□ -1.54
HPS3Q969F9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.43□□□□□ -1.54
HPS3Q969F9 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AL109741.2-201ENST00000455561 343 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AL122001.1-201ENST00000457027 370 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS3Q969F9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC004453.1-201ENST00000487895 408 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 RPF2P2-201ENST00000504693 896 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS3Q969F9 RNU6-885P-201ENST00000516607 104 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS3Q969F9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS3Q969F9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC125611.1-201ENST00000549563 229 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 HIGD1AP17-201ENST00000554576 276 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AL049839.1-201ENST00000556151 657 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 OR4K7P-201ENST00000580232 945 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC017100.2-201ENST00000584628 355 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC087763.1-201ENST00000603391 286 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 IRF5P1-201ENST00000504852 2164 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.43□□□□□ -1.54
HPS3Q969F9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 AC109315.1-201ENST00000584143 1347 ntBASIC5.43□□□□□ -1.54
HPS3Q969F9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HPS3Q969F9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.42□□□□□ -1.54
HPS3Q969F9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HPS3Q969F9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HPS3Q969F9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.42□□□□□ -1.54
HPS3Q969F9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HPS3Q969F9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.42□□□□□ -1.54
HPS3Q969F9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HPS3Q969F9 AL645733.1-201ENST00000402250 217 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 RNU2-42P-201ENST00000410697 113 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 RNU4-72P-201ENST00000410754 173 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 AC019050.1-201ENST00000418508 492 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 PTP4A1P5-201ENST00000420305 455 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 RGS17P1-201ENST00000423358 553 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.42□□□□□ -1.54
HPS3Q969F9 RPL37P1-201ENST00000432310 284 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.42□□□□□ -1.54
HPS3Q969F9 MTND5P2-201ENST00000442927 1142 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 Z99714.1-201ENST00000450463 807 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 MTND1P16-201ENST00000465177 898 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 AC010307.1-201ENST00000467206 836 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 RN7SL809P-201ENST00000482040 297 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 LINC00888-204ENST00000487386 421 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AC010587.2-201ENST00000511727 448 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 ENPP7P9-201ENST00000514456 627 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 RNU6-488P-201ENST00000515918 99 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 RN7SKP96-201ENST00000516948 297 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 CDH12P4-201ENST00000517835 295 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 CDH12P3-201ENST00000517935 295 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 CDH12P1-201ENST00000518435 295 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.42□□□□□ -1.54
HPS3Q969F9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.42□□□□□ -1.54
HPS3Q969F9 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.42□□□□□ -1.54
HPS3Q969F9 CYCSP40-201ENST00000575927 294 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AC093783.1-201ENST00000612976 329 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 AC015914.2-201ENST00000618167 288 ntBASIC5.42□□□□□ -1.54
HPS3Q969F9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HPS3Q969F9 AC019206.1-201ENST00000621938 425 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms