Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AP003730.1-201ENST00000524605 285 ntBASIC5.08□□□□□ -1.6
HERVK_113Q902F9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AC116553.2-201ENST00000564203 463 ntBASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AC022916.3-201ENST00000592961 742 ntBASIC5.08□□□□□ -1.6
HERVK_113Q902F9 RPP40P2-201ENST00000603596 712 ntBASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AC007786.3-201ENST00000615154 596 ntBASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 AC138393.1-206ENST00000540997 1886 ntBASIC5.08□□□□□ -1.6
HERVK_113Q902F9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERVK_113Q902F9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL590762.2-201ENST00000395798 571 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL512430.2-201ENST00000406786 339 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 SNORA11.2-201ENST00000408318 127 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 RNU6-272P-201ENST00000411028 104 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 OR51B3P-201ENST00000412287 913 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 RPS7P9-201ENST00000414704 586 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 MTCO2P23-201ENST00000425216 680 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL451139.1-201ENST00000434718 346 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 ELOCP11-201ENST00000436690 332 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 RPL7AP61-201ENST00000443410 636 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 ELOCP16-201ENST00000444494 332 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 EXOSC3P1-201ENST00000448649 500 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC233982.1-201ENST00000451247 436 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 NAP1L1P3-201ENST00000462291 880 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC008885.2-201ENST00000509506 930 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 RNU6-709P-201ENST00000517257 104 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC107918.3-201ENST00000533272 382 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 MTND1P8-201ENST00000571424 950 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC027455.1-201ENST00000574104 594 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 RN7SL290P-201ENST00000578661 300 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 MTCO2P2-201ENST00000591258 225 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC091488.1-201ENST00000604239 660 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL050303.3-201ENST00000613704 284 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC015804.1-201ENST00000622935 435 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC104985.3-201ENST00000623479 597 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AL109659.3-201ENST00000624985 950 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 MIR492-201ENST00000638676 116 ntBASIC5.07□□□□□ -1.6
HERVK_113Q902F9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HERVK_113Q902F9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AC025263.3-201ENST00000622965 1396 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AC021146.4-201ENST00000309229 279 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 RNU1-13P-201ENST00000384499 162 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 Z98745.1-201ENST00000402553 494 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 RNA5SP317-201ENST00000410176 116 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 RN7SKP202-201ENST00000410439 330 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 RNA5SP311-201ENST00000411290 116 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 RPL23AP26-201ENST00000412728 464 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 NRBF2P2-201ENST00000413087 861 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AL009174.1-201ENST00000426577 416 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 GTF2IP3-201ENST00000433887 494 ntBASIC5.06□□□□□ -1.6
HERVK_113Q902F9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.06□□□□□ -1.6
HERVK_113Q902F9 MTCYBP42-201ENST00000444653 1130 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms