Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 MTCO1P14-201ENST00000441695 1559 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SNORA70E-201ENST00000384492 135 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 RPS15AP40-201ENST00000419621 391 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 RPEP2-201ENST00000432149 701 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AL353718.1-201ENST00000451028 517 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC009220.1-201ENST00000451614 275 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 snoU13.7-201ENST00000459220 104 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC087385.1-201ENST00000475062 312 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC104108.1-201ENST00000509930 412 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC025768.1-201ENST00000510057 267 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 MTND2P26-201ENST00000528255 1029 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC135001.1-201ENST00000544546 283 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AL352979.3-201ENST00000553515 247 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SERPINE4P-201ENST00000554978 281 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC124068.1-201ENST00000563131 678 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 EIF1P6-201ENST00000600054 334 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC090948.1-201ENST00000607464 549 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 uc_338.13-201ENST00000618243 179 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC018926.3-201ENST00000618841 406 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AP003400.6-201ENST00000624698 740 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 AC046144.1-201ENST00000478559 1853 ntBASIC4.41□□□□□ -1.7
HLA-DPA1P20036 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DPA1P20036 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DPA1P20036 RNU6-1339P-201ENST00000363574 91 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 SNORA51.12-201ENST00000384448 134 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 MIR141-201ENST00000384975 95 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 RPL23AP59-201ENST00000399415 461 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 SNORA11F-201ENST00000408237 128 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AL139095.3-201ENST00000419672 1203 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AL121882.1-201ENST00000422893 417 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 RPS12P5-201ENST00000423449 371 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AC073335.1-201ENST00000427776 363 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 SKP1P3-201ENST00000429280 487 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 PPIAP3-201ENST00000450588 505 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 C1GALT1P3-201ENST00000522049 819 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 OR5BC1P-201ENST00000529327 739 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 ATP5F1P7-201ENST00000567330 760 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 RPL26P30-202ENST00000602923 645 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AC113403.1-201ENST00000604910 193 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 FP325313.1-201ENST00000638228 703 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 FAM157B-203ENST00000639350 358 ntBASIC4.4□□□□□ -1.71
HLA-DPA1P20036 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DPA1P20036 AC025031.4-201ENST00000621248 3271 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms