Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 AC138915.3-201ENST00000562908 1389 ntBASIC5.45□□□□□ -1.54
ATF4P18848 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 MTCO1P9-201ENST00000505577 1534 ntBASIC5.45□□□□□ -1.54
ATF4P18848 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 TMSB4XP4-201ENST00000323496 618 ntBASIC5.45□□□□□ -1.54
ATF4P18848 RN7SKP118-201ENST00000364331 330 ntBASIC5.45□□□□□ -1.54
ATF4P18848 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
ATF4P18848 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 CCDC58P2-201ENST00000417131 366 ntBASIC5.45□□□□□ -1.54
ATF4P18848 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 AL391219.1-201ENST00000422570 483 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC092832.1-201ENST00000422934 400 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC007283.2-201ENST00000424739 197 ntBASIC5.45□□□□□ -1.54
ATF4P18848 BRWD1P3-201ENST00000428816 390 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AL731534.1-201ENST00000434711 269 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 GAPDHP33-201ENST00000443168 1013 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AL450996.1-201ENST00000445574 1202 ntBASIC5.45□□□□□ -1.54
ATF4P18848 SLC25A18P1-201ENST00000449385 454 ntBASIC5.45□□□□□ -1.54
ATF4P18848 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 AC083899.1-201ENST00000454465 3819 ntBASIC5.45□□□□□ -1.54
ATF4P18848 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
ATF4P18848 OR7E62P-201ENST00000456741 477 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 UBDP1-202ENST00000457888 382 ntBASIC5.45□□□□□ -1.54
ATF4P18848 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 RN7SL160P-201ENST00000468558 284 ntBASIC5.45□□□□□ -1.54
ATF4P18848 RPL21P103-201ENST00000479921 488 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 OR7E163P-201ENST00000505943 894 ntBASIC5.45□□□□□ -1.54
ATF4P18848 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 RNU6-528P-201ENST00000516926 100 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC022616.3-201ENST00000523940 148 ntBASIC5.45□□□□□ -1.54
ATF4P18848 OR4R3P-201ENST00000525084 838 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC011979.2-201ENST00000527568 352 ntBASIC5.45□□□□□ -1.54
ATF4P18848 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 AC026826.3-201ENST00000561747 158 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.45□□□□□ -1.54
ATF4P18848 HNRNPCP4-201ENST00000571636 900 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC012146.2-201ENST00000576545 416 ntBASIC5.45□□□□□ -1.54
ATF4P18848 RN7SL689P-201ENST00000577215 297 ntBASIC5.45□□□□□ -1.54
ATF4P18848 H3F3BP2-201ENST00000583907 357 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.45□□□□□ -1.54
ATF4P18848 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 RPL26P30-202ENST00000602923 645 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC108451.2-201ENST00000603875 538 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AL031176.1-201ENST00000604554 466 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AC097467.4-201ENST00000605504 141 ntBASIC5.45□□□□□ -1.54
ATF4P18848 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 AC008536.2-201ENST00000607284 349 ntBASIC5.45□□□□□ -1.54
ATF4P18848 AL161637.1-201ENST00000622380 412 ntBASIC5.45□□□□□ -1.54
ATF4P18848 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 FOLH1B-202ENST00000529567 2145 ntBASIC5.45□□□□□ -1.54
ATF4P18848 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
ATF4P18848 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.45□□□□□ -1.54
ATF4P18848 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 AC022893.2-201ENST00000564832 3296 ntBASIC5.45□□□□□ -1.54
ATF4P18848 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.45□□□□□ -1.54
ATF4P18848 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATF4P18848 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF4P18848 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
ATF4P18848 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATF4P18848 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 AL138713.1-201ENST00000624026 2130 ntBASIC5.44□□□□□ -1.54
ATF4P18848 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.44□□□□□ -1.54
ATF4P18848 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.44□□□□□ -1.54
ATF4P18848 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms