Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 AC021146.4-201ENST00000309229 279 ntBASIC4.82□□□□□ -1.64
MSI1O43347 OR5H2-201ENST00000355273 945 ntBASIC4.82□□□□□ -1.64
MSI1O43347 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MSI1O43347 IGKV7-3-201ENST00000357453 298 ntBASIC4.82□□□□□ -1.64
MSI1O43347 SNORD113-6-201ENST00000363345 75 ntBASIC4.82□□□□□ -1.64
MSI1O43347 RNU6-1339P-201ENST00000363574 91 ntBASIC4.82□□□□□ -1.64
MSI1O43347 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
MSI1O43347 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 MIR659-201ENST00000384963 97 ntBASIC4.82□□□□□ -1.64
MSI1O43347 RNA5SP397-201ENST00000391323 118 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AL590084.1-201ENST00000407885 387 ntBASIC4.82□□□□□ -1.64
MSI1O43347 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 FGF7P5-201ENST00000441829 291 ntBASIC4.82□□□□□ -1.64
MSI1O43347 TDGF1P1-201ENST00000445734 527 ntBASIC4.82□□□□□ -1.64
MSI1O43347 ARL2BPP10-201ENST00000446487 531 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AL035551.1-201ENST00000446931 348 ntBASIC4.82□□□□□ -1.64
MSI1O43347 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.82□□□□□ -1.64
MSI1O43347 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 MTND2P14-201ENST00000482139 351 ntBASIC4.82□□□□□ -1.64
MSI1O43347 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 AC105313.1-201ENST00000509121 353 ntBASIC4.82□□□□□ -1.64
MSI1O43347 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 AC007016.1-201ENST00000512110 244 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AC108471.1-201ENST00000513977 287 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AC124293.1-201ENST00000530034 493 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 AP001781.1-201ENST00000530977 207 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.82□□□□□ -1.64
MSI1O43347 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 AC124856.1-201ENST00000600819 896 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AP003392.5-201ENST00000607857 415 ntBASIC4.82□□□□□ -1.64
MSI1O43347 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.82□□□□□ -1.64
MSI1O43347 AP000238.1-201ENST00000608759 426 ntBASIC4.82□□□□□ -1.64
MSI1O43347 TUSC7.1-201ENST00000610969 165 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AL359757.1-201ENST00000623176 255 ntBASIC4.82□□□□□ -1.64
MSI1O43347 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MSI1O43347 ZNF663P-202ENST00000641770 1131 ntBASIC4.82□□□□□ -1.64
MSI1O43347 AC000367.1-201ENST00000452711 1766 ntBASIC4.82□□□□□ -1.64
MSI1O43347 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MSI1O43347 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
MSI1O43347 ZNF137P-201ENST00000456718 1920 ntBASIC4.82□□□□□ -1.64
MSI1O43347 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
MSI1O43347 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 DHX40P1-201ENST00000588725 1412 ntBASIC4.81□□□□□ -1.64
MSI1O43347 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 MTCO1P6-201ENST00000481192 1384 ntBASIC4.81□□□□□ -1.64
MSI1O43347 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 AL359922.3-201ENST00000624779 1670 ntBASIC4.81□□□□□ -1.64
MSI1O43347 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 SNORD113.2-201ENST00000364166 89 ntBASIC4.81□□□□□ -1.64
MSI1O43347 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AL807761.1-201ENST00000417622 171 ntBASIC4.81□□□□□ -1.64
MSI1O43347 RPEP3-201ENST00000425462 676 ntBASIC4.81□□□□□ -1.64
MSI1O43347 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 OR5AW1P-201ENST00000426334 1006 ntBASIC4.81□□□□□ -1.64
MSI1O43347 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MSI1O43347 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AP001324.1-201ENST00000428553 399 ntBASIC4.81□□□□□ -1.64
MSI1O43347 TXNL1P1-201ENST00000429528 554 ntBASIC4.81□□□□□ -1.64
MSI1O43347 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.81□□□□□ -1.64
MSI1O43347 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 GSTA7P-201ENST00000438425 448 ntBASIC4.81□□□□□ -1.64
MSI1O43347 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.81□□□□□ -1.64
MSI1O43347 Z99714.1-201ENST00000450463 807 ntBASIC4.81□□□□□ -1.64
MSI1O43347 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AL133244.1-201ENST00000456007 258 ntBASIC4.81□□□□□ -1.64
MSI1O43347 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.81□□□□□ -1.64
MSI1O43347 AC098799.3-201ENST00000506095 438 ntBASIC4.81□□□□□ -1.64
MSI1O43347 AC113347.3-201ENST00000509113 148 ntBASIC4.81□□□□□ -1.64
MSI1O43347 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.81□□□□□ -1.64
MSI1O43347 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.81□□□□□ -1.64
MSI1O43347 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
MSI1O43347 POLR2KP1-201ENST00000553226 168 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms