Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MTCYBP37-201ENST00000510642 1133 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 OR5BM1P-201ENST00000512021 366 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 Y_RNA.719-201ENST00000517156 106 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 MTND1P5-201ENST00000517906 940 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 LRRC6P1-201ENST00000532188 885 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AP005119.2-201ENST00000579735 1105 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AL356218.2-201ENST00000605264 187 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AC006338.2-201ENST00000616864 791 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AP000526.1-201ENST00000603308 1388 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AL356473.1-201ENST00000406203 1408 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 AC009643.2-201ENST00000603543 1448 ntBASIC4.89□□□□□ -1.63
EBF3Q9H4W6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 DDX18P4-201ENST00000511690 1966 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 RNU6-623P-201ENST00000363143 105 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 BMS1P3-201ENST00000372011 932 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL121978.1-201ENST00000402778 359 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 ELOCP19-201ENST00000411919 318 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC140479.3-201ENST00000418944 1126 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC234781.4-201ENST00000419384 244 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL390023.1-201ENST00000428836 262 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 DLGAP5P1-201ENST00000430307 464 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC005345.1-201ENST00000431868 217 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 MTND2P20-201ENST00000440805 661 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 RPL10P17-201ENST00000453852 316 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC079168.2-201ENST00000453977 416 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC239798.3-201ENST00000454459 408 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 PTGES3P5-201ENST00000455109 434 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 RN7SL517P-201ENST00000462240 305 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 MTND4LP3-201ENST00000468320 276 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC103987.1-201ENST00000473394 348 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC011352.1-201ENST00000512300 793 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 RPL23AP53-201ENST00000521854 457 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC005868.1-201ENST00000536421 331 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC080078.2-201ENST00000603766 501 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC073387.2-201ENST00000604797 784 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 MIR6830-201ENST00000636015 70 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AC006927.3-201ENST00000638789 384 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 LINC01355-201ENST00000566551 5444 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 AL592148.3-201ENST00000608771 2646 ntBASIC4.88□□□□□ -1.63
EBF3Q9H4W6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
EBF3Q9H4W6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 SMG1P6-201ENST00000532337 2930 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 Y_RNA.51-201ENST00000362725 102 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms