Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 AL109653.1-201ENST00000603091 248 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC002069.2-201ENST00000603580 883 ntBASIC3.78□□□□□ -1.8
LMO4P61968 Z82195.1-201ENST00000604558 398 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC092106.3-201ENST00000611308 722 ntBASIC3.78□□□□□ -1.8
LMO4P61968 PART1_2.1-201ENST00000612397 250 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC008121.2-201ENST00000614647 523 ntBASIC3.78□□□□□ -1.8
LMO4P61968 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 AC026585.1-201ENST00000619582 524 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.78□□□□□ -1.8
LMO4P61968 AC015908.5-201ENST00000623289 343 ntBASIC3.78□□□□□ -1.8
LMO4P61968 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 SMG1P4-204ENST00000523028 4131 ntBASIC3.78□□□□□ -1.8
LMO4P61968 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 AL359922.3-201ENST00000624779 1670 ntBASIC3.78□□□□□ -1.81
LMO4P61968 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
LMO4P61968 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.78□□□□□ -1.81
LMO4P61968 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.77□□□□□ -1.81
LMO4P61968 AC005332.5-201ENST00000591222 2919 ntBASIC3.77□□□□□ -1.81
LMO4P61968 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 RNU6-1242P-201ENST00000391052 103 ntBASIC3.77□□□□□ -1.81
LMO4P61968 SNORA68.2-201ENST00000391263 128 ntBASIC3.77□□□□□ -1.81
LMO4P61968 PEX12P1-201ENST00000400284 1048 ntBASIC3.77□□□□□ -1.81
LMO4P61968 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 RN7SKP182-201ENST00000410772 298 ntBASIC3.77□□□□□ -1.81
LMO4P61968 RNU6-603P-201ENST00000411403 107 ntBASIC3.77□□□□□ -1.81
LMO4P61968 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.77□□□□□ -1.81
LMO4P61968 XKRYP4-201ENST00000414395 483 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 TMSB10P2-201ENST00000416049 131 ntBASIC3.77□□□□□ -1.81
LMO4P61968 LINC01881-201ENST00000416103 412 ntBASIC3.77□□□□□ -1.81
LMO4P61968 GNG5P5-201ENST00000420444 220 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC090960.1-201ENST00000421072 306 ntBASIC3.77□□□□□ -1.81
LMO4P61968 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.77□□□□□ -1.81
LMO4P61968 RPS29P17-201ENST00000430795 166 ntBASIC3.77□□□□□ -1.81
LMO4P61968 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 CBX1P1-201ENST00000440184 427 ntBASIC3.77□□□□□ -1.81
LMO4P61968 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.77□□□□□ -1.81
LMO4P61968 AC097499.1-201ENST00000444277 208 ntBASIC3.77□□□□□ -1.81
LMO4P61968 MRPL48P1-201ENST00000445390 636 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.77□□□□□ -1.81
LMO4P61968 AL589765.3-201ENST00000446084 462 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC092685.1-201ENST00000447960 1243 ntBASIC3.77□□□□□ -1.81
LMO4P61968 XKRYP5-201ENST00000449659 483 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 AL935212.3-201ENST00000450729 284 ntBASIC3.77□□□□□ -1.81
LMO4P61968 EIF4A1P11-201ENST00000451239 222 ntBASIC3.77□□□□□ -1.81
LMO4P61968 ART2BP-201ENST00000453501 499 ntBASIC3.77□□□□□ -1.81
LMO4P61968 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.77□□□□□ -1.81
LMO4P61968 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LMO4P61968 AC010618.1-201ENST00000469924 477 ntBASIC3.77□□□□□ -1.81
LMO4P61968 RN7SL810P-201ENST00000493031 276 ntBASIC3.77□□□□□ -1.81
LMO4P61968 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 AC118282.2-201ENST00000508739 374 ntBASIC3.77□□□□□ -1.81
LMO4P61968 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 RNU6-347P-201ENST00000516658 105 ntBASIC3.77□□□□□ -1.81
LMO4P61968 IGLVIV-65-201ENST00000517313 360 ntBASIC3.77□□□□□ -1.81
LMO4P61968 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 AC087373.1-201ENST00000524920 491 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 MTND4P33-201ENST00000556706 766 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 AP005136.1-201ENST00000579765 429 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.77□□□□□ -1.81
LMO4P61968 Z99497.2-201ENST00000603634 310 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC080013.3-201ENST00000606839 578 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC055764.2-201ENST00000610089 670 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC116447.1-201ENST00000613153 453 ntBASIC3.77□□□□□ -1.81
LMO4P61968 AC013470.4-201ENST00000619978 986 ntBASIC3.77□□□□□ -1.81
LMO4P61968 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 AC015726.3-201ENST00000624501 418 ntBASIC3.77□□□□□ -1.81
LMO4P61968 LINC01808-202ENST00000641680 1116 ntBASIC3.77□□□□□ -1.81
LMO4P61968 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 VN2R3P-201ENST00000422626 1412 ntBASIC3.77□□□□□ -1.81
LMO4P61968 GTF2H2B-203ENST00000508065 1432 ntBASIC3.77□□□□□ -1.81
LMO4P61968 SALL4P2-201ENST00000423288 2910 ntBASIC3.77□□□□□ -1.81
LMO4P61968 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LMO4P61968 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LMO4P61968 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.77□□□□□ -1.81
LMO4P61968 AC073136.1-201ENST00000449426 2884 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms