Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR1S1-201ENST00000624470 978 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 U3.53-201ENST00000628922 216 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC091046.3-201ENST00000631455 1574 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDL3P58872 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
RHBDL3P58872 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RHBDL3P58872 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDL3P58872 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 ZNF137P-201ENST00000456718 1920 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 HMGB1P5-201ENST00000255320 642 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 U3.35-201ENST00000408405 208 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 AL450992.3-201ENST00000413192 568 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 AC007738.1-201ENST00000413892 348 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.57□□□□□ -1.52
RHBDL3P58872 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDL3P58872 RPS15AP1-201ENST00000457423 391 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 RPL21P131-201ENST00000497298 483 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 TPT1P8-201ENST00000510120 555 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 AC048346.1-201ENST00000510247 144 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 RNA5SP360-201ENST00000516555 118 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 RNA5SP135-201ENST00000517019 125 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AC136624.4-201ENST00000573044 370 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 AC069061.3-201ENST00000582254 823 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 AL133338.2-201ENST00000604292 736 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AC024060.1-201ENST00000607052 494 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDL3P58872 AL592148.2-201ENST00000612210 372 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDL3P58872 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDL3P58872 MTND5P28-201ENST00000438005 1594 ntBASIC5.57□□□□□ -1.52
RHBDL3P58872 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDL3P58872 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDL3P58872 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RHBDL3P58872 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RHBDL3P58872 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 AC125257.1-201ENST00000560400 2930 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RHBDL3P58872 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 RNU4-25P-201ENST00000410569 230 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 RN7SKP97-201ENST00000410966 333 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDL3P58872 AC004448.2-201ENST00000422360 586 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 GTF2IP3-201ENST00000433887 494 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 MTCO1P53-201ENST00000441633 699 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.56□□□□□ -1.52
RHBDL3P58872 AL162591.2-201ENST00000449634 317 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 MTND2P28-201ENST00000457540 1044 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 AC093267.1-201ENST00000489176 961 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 NDUFB4P12-201ENST00000513465 390 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 AC091163.3-201ENST00000518269 1144 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDL3P58872 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDL3P58872 PART1_2.1-201ENST00000612397 250 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDL3P58872 LINC00901.1-201ENST00000617252 152 ntBASIC5.56□□□□□ -1.52
RHBDL3P58872 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms