Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK1P53667 AP000827.1-201ENST00000527814 258 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 AC005868.1-201ENST00000536421 331 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK1P53667 AL121594.4-201ENST00000556211 1196 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC116553.2-201ENST00000564203 463 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 MTND4LP24-201ENST00000572277 291 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 DNAJC19P3-201ENST00000594491 331 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 VN1R9P-201ENST00000614184 867 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AL158196.1-201ENST00000616786 434 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC073569.3-201ENST00000619055 682 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC138907.10-201ENST00000623708 983 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC103798.2-201ENST00000624292 632 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LIMK1P53667 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.62□□□□□ -1.67
LIMK1P53667 MFSD8-213ENST00000641134 1327 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LIMK1P53667 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LIMK1P53667 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK1P53667 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK1P53667 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 SNORA62.3-201ENST00000365110 153 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK1P53667 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK1P53667 AP000580.1-201ENST00000404439 358 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 RNA5SP317-201ENST00000410176 116 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 RNA5SP311-201ENST00000411290 116 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 RPS12P23-201ENST00000419579 400 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 AL645608.4-201ENST00000423619 154 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK1P53667 CKS1BP6-201ENST00000424932 240 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 ELOCP11-201ENST00000436690 332 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 ELOCP16-201ENST00000444494 332 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 RHEBP2-201ENST00000450289 600 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 RPL7L1P8-201ENST00000469911 741 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC108751.2-201ENST00000469993 231 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 UQCRHP4-201ENST00000471686 272 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 TRBV8-2-201ENST00000475637 270 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 DEFB109F-201ENST00000491870 277 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 FTH1P24-201ENST00000503502 462 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 RNU5A-7P-201ENST00000515979 116 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 RNA5SP315-201ENST00000516340 116 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 RNA5SP143-201ENST00000516936 115 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 RNA5SP312-201ENST00000517068 116 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 Y_RNA.719-201ENST00000517156 106 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC068339.2-201ENST00000534395 618 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.61□□□□□ -1.67
LIMK1P53667 AL049830.4-201ENST00000555149 351 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC105129.1-201ENST00000560250 297 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC027104.1-201ENST00000563702 681 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC099676.1-201ENST00000608886 657 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 AC099669.2-201ENST00000616549 437 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 AC078880.5-201ENST00000617845 421 ntBASIC4.61□□□□□ -1.67
LIMK1P53667 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK1P53667 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
LIMK1P53667 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LIMK1P53667 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LIMK1P53667 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.6□□□□□ -1.67
LIMK1P53667 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.6□□□□□ -1.67
LIMK1P53667 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LIMK1P53667 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LIMK1P53667 OR52E6-202ENST00000379946 954 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 MIR124-3-201ENST00000384866 87 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LIMK1P53667 AL022722.2-201ENST00000402519 180 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 RPL23AP48-201ENST00000406913 488 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AL603766.1-201ENST00000407763 664 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 RN7SKP199-201ENST00000410325 305 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 HMGB3P31-201ENST00000413333 595 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 RPL21P108-201ENST00000413857 481 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 MTND2P15-201ENST00000418575 892 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms