Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPS27AP19-201ENST00000597285 458 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC036176.3-201ENST00000602456 418 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL359704.2-201ENST00000604335 521 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC009597.2-201ENST00000604659 592 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 uc_338.12-201ENST00000616344 181 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL354718.1-201ENST00000619764 589 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC103564.3-201ENST00000621194 220 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC079597.1-201ENST00000624306 508 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 MTND4LP32-201ENST00000636111 270 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC007114.2-201ENST00000576014 4281 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC009120.2-204ENST00000621548 2032 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 MAPK10-357ENST00000641831 2858 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 RNU4-66P-201ENST00000365199 138 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 U3.20-201ENST00000390909 217 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AL359634.1-202ENST00000404721 284 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC245054.2-201ENST00000415639 319 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ARL5AP1-201ENST00000418991 388 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 NMD3P2-201ENST00000421815 761 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AL451136.1-201ENST00000435399 325 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC012075.1-201ENST00000436549 580 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 OR7E116P-201ENST00000448529 957 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL10P7-201ENST00000495649 625 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 FAM206BP-201ENST00000510179 541 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC005741.1-201ENST00000511094 432 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC021146.1-201ENST00000511202 716 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC112191.2-201ENST00000522428 333 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC106785.4-201ENST00000569492 412 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR378C-201ENST00000578683 81 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AP005119.1-201ENST00000580956 292 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC090241.1-201ENST00000587732 621 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 GLUD1P4-201ENST00000590914 418 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 XIAPP1-201ENST00000603162 600 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC004241.2-201ENST00000614562 444 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 MRPL57P3-201ENST00000619218 176 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AL133216.2-202ENST00000634512 349 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011460.1-201ENST00000636268 1834 ntBASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDHGA11Q9Y5H2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011493.1-201ENST00000596753 1632 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 AP001350.1-201ENST00000601906 1524 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RNU6-97P-201ENST00000363387 104 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RNA5SP302-201ENST00000364896 100 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR454-201ENST00000390180 115 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 LDHAP5-201ENST00000394996 622 ntBASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SKP188-201ENST00000410789 317 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms