Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 DEFB109D-201ENST00000529497 240 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 MIR4716-201ENST00000579628 84 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC067852.7-201ENST00000623270 535 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC010608.2-201ENST00000624830 470 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 CFTRP2-201ENST00000634304 199 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AC116667.1-201ENST00000604855 2072 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 AL031985.3-201ENST00000565390 2449 ntBASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTNNA3Q9UI47 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 RN7SKP280-201ENST00000364196 304 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 RPS27AP11-201ENST00000402798 447 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 RN7SKP33-201ENST00000410942 340 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 DPY19L1P2-201ENST00000426647 915 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 BUD31P2-201ENST00000449374 300 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC107016.1-201ENST00000550463 337 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC233309.1-201ENST00000619522 751 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 OR8B1P-202ENST00000641132 1178 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 AC097504.1-201ENST00000515103 2415 ntBASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CTNNA3Q9UI47 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 Z82217.1-201ENST00000625157 8149 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 SNORA60-201ENST00000362396 134 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RN7SKP202-201ENST00000410439 330 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RNA5SP306-201ENST00000411087 107 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 CASKP1-201ENST00000412870 582 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AL450992.3-201ENST00000413192 568 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RAC1P3-201ENST00000416129 580 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 CYP4F29P-201ENST00000420685 446 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RWDD4P2-201ENST00000426392 563 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 MTCYBP29-201ENST00000436327 1006 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RWDD4P1-201ENST00000488019 565 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RPL29P14-201ENST00000495837 428 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AP000926.3-201ENST00000497201 299 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AGGF1P6-201ENST00000569213 976 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 RPL23AP87-202ENST00000573039 466 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC012417.1-201ENST00000582307 1039 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC006130.2-201ENST00000586202 326 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 BMS1P7-201ENST00000602440 1052 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 HMGB1P50-201ENST00000605814 607 ntBASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.91□□□□□ -1.62
CTNNA3Q9UI47 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms