Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 SPATA2P1-201ENST00000431223 2055 ntBASIC4.36□□□□□ -1.71
TM9SF4Q92544 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TM9SF4Q92544 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM9SF4Q92544 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC139713.2-214ENST00000642059 1811 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 RNU1-94P-201ENST00000362627 173 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 RNU6-906P-201ENST00000384700 70 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC009237.10-201ENST00000414112 510 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 LINC01347-201ENST00000417964 355 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 XKRYP1-201ENST00000423438 492 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC092648.1-201ENST00000425870 423 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 CETN4P-201ENST00000432407 469 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 XKRYP2-201ENST00000432915 492 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AL035458.1-201ENST00000433096 585 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AL035246.1-201ENST00000433554 1255 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 CYCSP11-201ENST00000436426 315 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC004938.1-201ENST00000438468 308 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 RN7SL817P-201ENST00000480777 288 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 RN7SKP141-201ENST00000516167 338 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 RNA5SP392-201ENST00000516905 112 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 MTND2P38-201ENST00000522536 667 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 DUXAP5-201ENST00000529668 529 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 RN7SL176P-201ENST00000580352 264 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AL445423.1-201ENST00000609941 536 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 AL133243.1-201ENST00000614487 366 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 LINC00901.1-201ENST00000617252 152 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AP002791.1-201ENST00000623291 381 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC017104.5-201ENST00000637647 639 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 AC132825.7-201ENST00000638744 335 ntBASIC4.35□□□□□ -1.71
TM9SF4Q92544 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
TM9SF4Q92544 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM9SF4Q92544 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC126755.2-208ENST00000327792 462 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC138969.1-213ENST00000331436 462 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC068538.1-201ENST00000376856 336 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 MCTS2P-201ENST00000394552 546 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC092638.1-201ENST00000411966 1275 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 HIGD1AP15-201ENST00000416198 280 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AC005005.2-201ENST00000420779 380 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM9SF4Q92544 GTF2IP2-201ENST00000424290 697 ntBASIC4.34□□□□□ -1.71
TM9SF4Q92544 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.34□□□□□ -1.71
TM9SF4Q92544 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms