Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC009977.1-201ENST00000586015 570 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 NRBF2P1-201ENST00000587407 859 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 C8orf59P2-201ENST00000603441 271 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC233280.2-201ENST00000603917 1070 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 SUMO2P15-201ENST00000604285 278 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC012150.2-201ENST00000621300 544 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AC022905.1-201ENST00000503430 3048 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AL033543.1-201ENST00000623440 13454 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 ZNF402P-201ENST00000404435 3100 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 AL354685.2-201ENST00000448218 1447 ntBASIC6.42□□□□□ -1.38
NPAS4Q8IUM7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AP002001.2-201ENST00000529025 1469 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AP000473.2-201ENST00000602659 1537 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL391262.1-201ENST00000556558 1992 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 MTND5P17-201ENST00000418405 1603 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC016769.3-201ENST00000396562 315 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 ARF4P3-201ENST00000397387 509 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC211486.3-201ENST00000412694 621 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 MRPL53P1-201ENST00000414323 319 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC073136.2-201ENST00000417282 849 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 RPS4XP5-201ENST00000419038 768 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL662874.1-201ENST00000426065 230 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 MTCO2P11-201ENST00000431069 680 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL451136.1-201ENST00000435399 325 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL450263.2-201ENST00000439400 589 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 PSPHP1-201ENST00000450062 261 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC112187.1-201ENST00000455837 479 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC093166.4-201ENST00000457867 318 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 RN7SL352P-201ENST00000466002 277 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 RPS23P6-201ENST00000466136 431 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 RPS17P15-201ENST00000475609 349 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AP001025.2-201ENST00000490908 477 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC073581.1-201ENST00000519036 575 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 IGLV2-28-201ENST00000520681 304 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 RPL21P5-201ENST00000554662 472 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 MIR1273E-201ENST00000581165 102 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AP000907.4-201ENST00000604143 237 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 AL445264.1-201ENST00000621719 171 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 HSPA8P14-201ENST00000552265 1805 ntBASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.41□□□□□ -1.38
NPAS4Q8IUM7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms