Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC010401.2-201ENST00000575137 4934 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 RNU6-853P-201ENST00000364306 107 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 RNU6-343P-201ENST00000364709 104 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AL807761.1-201ENST00000417622 171 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 USP9YP16-201ENST00000430287 407 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 RPS15AP9-201ENST00000439856 381 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 USP9YP23-201ENST00000455085 407 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC007998.1-201ENST00000474156 672 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 RN7SL382P-201ENST00000482631 282 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC025458.1-201ENST00000506046 166 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 RNU6-1046P-201ENST00000516538 107 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AP002373.2-201ENST00000541631 1060 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC004805.3-201ENST00000603178 310 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AL355598.1-201ENST00000604169 202 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC022467.1-201ENST00000614738 749 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AL596244.1-201ENST00000567068 3779 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC010329.1-201ENST00000593903 8328 ntBASIC6.88□□□□□ -1.31
RNF135Q8IUD6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF135Q8IUD6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RIOK3P1-201ENST00000418778 1528 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC016251.2-201ENST00000623393 3089 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RNU6-1097P-201ENST00000363586 107 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 Y_RNA.184-201ENST00000363884 108 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 Y_RNA.315-201ENST00000365117 102 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RNU6-169P-201ENST00000365336 107 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RNU6-921P-201ENST00000384361 107 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RN7SKP271-201ENST00000410528 320 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 UQCRBP1-201ENST00000421129 336 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RGS17P1-201ENST00000423358 553 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 MTND6P12-201ENST00000428247 522 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 GPR143P-201ENST00000434155 205 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC119618.1-201ENST00000434191 222 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PPIAP13-201ENST00000434706 478 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 IFNA20P-201ENST00000436840 528 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PPIAP27-201ENST00000453800 265 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 APOOP2-201ENST00000461561 539 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PABPC1P3-201ENST00000469174 459 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms