Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 SNRPEP3-201ENST00000338402 276 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 RNA5SP46-201ENST00000362370 120 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 RNU6-1243P-201ENST00000364028 107 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 OR2AT2P-201ENST00000413438 905 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 BMS1P17-202ENST00000416720 316 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 CYCSP10-201ENST00000417973 294 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL133173.1-201ENST00000423458 397 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL662874.1-201ENST00000426065 230 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 NIPA2P1-201ENST00000426223 976 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC115283.1-201ENST00000427353 400 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL035407.1-201ENST00000429211 571 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 UBE2D3P4-201ENST00000441973 436 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 KATNBL1P3-201ENST00000443475 909 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 RPL23AP35-201ENST00000451906 501 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 DDX39BP2-208ENST00000453923 258 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 RPS20P21-201ENST00000466859 343 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 SYPL1P1-201ENST00000473622 768 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC104685.1-201ENST00000502445 371 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 ZNF705CP-201ENST00000530515 889 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL356057.1-201ENST00000533798 831 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 VN1R92P-201ENST00000598511 928 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AP000811.1-201ENST00000603803 651 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC124312.4-201ENST00000605533 310 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC004223.4-201ENST00000612426 332 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 OR51H2P-202ENST00000641424 3046 ntBASIC5.03□□□□□ -1.6
RNF220Q5VTB9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF220Q5VTB9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 NEAT1-202ENST00000501122 22743 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 RNU6-553P-201ENST00000364047 96 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 DBIP1-201ENST00000401435 260 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL023807.1-201ENST00000407932 359 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 PIGPP2-201ENST00000411569 458 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC069218.2-201ENST00000411665 344 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 LINC00993-201ENST00000420453 540 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC092427.1-201ENST00000439177 601 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 RPL26P28-201ENST00000451325 435 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF220Q5VTB9 AC092757.1-201ENST00000467293 467 ntBASIC5.02□□□□□ -1.61
RNF220Q5VTB9 RPS24P16-201ENST00000497294 392 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms