Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5□□□□□ -1.61
PDS5AQ29RF7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5□□□□□ -1.61
PDS5AQ29RF7 RN7SL703P-201ENST00000578485 302 ntBASIC5□□□□□ -1.61
PDS5AQ29RF7 MIR5684-201ENST00000585074 65 ntBASIC5□□□□□ -1.61
PDS5AQ29RF7 AC099676.1-201ENST00000608886 657 ntBASIC5□□□□□ -1.61
PDS5AQ29RF7 AL050303.3-201ENST00000613704 284 ntBASIC5□□□□□ -1.61
PDS5AQ29RF7 CDRT1-208ENST00000630868 794 ntBASIC5□□□□□ -1.61
PDS5AQ29RF7 DDX18P6-201ENST00000450119 1997 ntBASIC5□□□□□ -1.61
PDS5AQ29RF7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDS5AQ29RF7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PDS5AQ29RF7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5□□□□□ -1.61
PDS5AQ29RF7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5□□□□□ -1.61
PDS5AQ29RF7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDS5AQ29RF7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDS5AQ29RF7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
PDS5AQ29RF7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDS5AQ29RF7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC011242.1-201ENST00000433596 1158 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC073587.1-201ENST00000447093 876 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 TRAV31-201ENST00000502780 342 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 NAMPTP2-201ENST00000505629 1115 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC026402.1-201ENST00000513642 170 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 MTCO3P27-201ENST00000514397 196 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AP003355.1-201ENST00000518956 587 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 IFITM8P-201ENST00000522529 394 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 OR8X1P-201ENST00000534542 869 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 MIR4286-201ENST00000580651 93 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC114878.2-201ENST00000604863 1251 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC034236.3-201ENST00000605999 461 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC112503.2-201ENST00000609005 552 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC023509.5-201ENST00000617434 807 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 MIR7702-201ENST00000621931 59 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC090617.9-201ENST00000623751 147 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AP005264.7-201ENST00000625003 745 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC010608.3-201ENST00000625048 527 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC004808.1-201ENST00000627671 721 ntBASIC4.99□□□□□ -1.61
PDS5AQ29RF7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.99□□□□□ -1.61
PDS5AQ29RF7 SCN1A-220ENST00000641603 12506 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 MIR122-201ENST00000385044 85 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 GSTA12P-201ENST00000402398 508 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 RNU6-628P-201ENST00000410675 107 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 BTF3P9-201ENST00000418784 283 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 MTND4LP13-201ENST00000425022 298 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AL645931.1-201ENST00000439737 410 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AL606517.1-201ENST00000446914 387 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 SUMO1P1-201ENST00000497904 306 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 GTF2IP9-201ENST00000502460 301 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 STMN1P2-201ENST00000508435 439 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC121161.1-201ENST00000510606 652 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC025918.2-201ENST00000558683 763 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC053481.4-201ENST00000583164 216 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC027449.1-201ENST00000608890 407 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AP001033.2-201ENST00000609701 1003 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AC138907.10-201ENST00000623708 983 ntBASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDS5AQ29RF7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms